RetrogeneDB ID: | retro_lafr_1014 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_6:57804772..57805279(+) | ||
Located in intron of: | ENSLAFG00000011313 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPP3R1 | ||
Ensembl ID: | ENSLAFG00000022682 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.84 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVD |
GNEASYP.EMCSHFD.DEIKRLGKRFKKLDLD.SGSLSVEEF.S.PEL..NPL..RVIDIFDTDG.GEVD | |
Retrocopy | GNEASYPAEMCSHFDQDEIKRLGKRFKKLDLDKSGSLSVEEFLSMPELRYNPLLRRVIDIFDTDGSGEVD |
Parental | FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD |
FKEFI.G.SQFSVKG..EQKLRFAF.IYDMDKDGYISNGELFQVL.MMVG.NLKD.QLQQ.VDKTII..D | |
Retrocopy | FKEFIVGASQFSVKGNEEQKLRFAFNIYDMDKDGYISNGELFQVLRMMVGSNLKDWQLQQLVDKTIIILD |
Parental | KDGDGRISFEEFCAVVGGLDIHKKMVVDV |
.DGDG.ISFEEF.AVV.GL.IHKK.V..V | |
Retrocopy | RDGDGKISFEEFSAVVRGLEIHKKLVLIV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |