Parental gene:

PPP3R1, ENSG00000221823

Aliases:PPP3R1, CALNB1, CNB, CNB1
Description:protein phosphatase 3, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9317]
Organism:Human (Homo sapiens)
Coordinates:2:68358369..68488362(-)


>ENSG00000221823
ATGGGAAATGAGGCAAGTTATCCTTTGGAAATGTGCTCACACTTTGATGCGGATGAAATTAAAAGGCTAGGAAAGAGATT
TAAGAAGCTTGATTTGGACAATTCTGGTTCTTTGAGTGTGGAAGAGTTCATGTCTCTGCCTGAGTTACAACAGAATCCTT
TAGTACAGCGAGTAATAGATATATTCGACACAGATGGGAATGGAGAAGTAGACTTTAAAGAATTCATTGAGGGCGTCTCT
CAGTTCAGTGTCAAAGGAGATAAGGAGCAGAAATTGAGGTTTGCTTTCCGTATCTATGACATGGATAAAGATGGCTATAT
TTCCAATGGGGAACTCTTCCAGGTATTGAAGATGATGGTGGGGAACAATCTGAAAGATACACAGTTACAGCAAATTGTAG
ACAAAACCATAATAAATGCAGATAAGGATGGAGATGGAAGAATATCCTTTGAAGAATTCTGTGCTGTTGTAGGTGGCCTA
GATATCCACAAAAAGATGGTGGTAGATGTGTGA

Library Parental gene expression (RPM)
bodymap2_liver 44 .78 RPM
bodymap2_lung 113 .75 RPM
bodymap2_breast 132 .14 RPM
bodymap2_adipose 147 .51 RPM
bodymap2_adrenal 93 .20 RPM
bodymap2_skeletal_muscle 92 .47 RPM
bodymap2_thyroid 85 .83 RPM
bodymap2_prostate 104 .68 RPM
bodymap2_colon 99 .42 RPM
bodymap2_testis 118 .34 RPM
bodymap2_brain 534 .76 RPM
bodymap2_heart 42 .85 RPM
bodymap2_white_blood_cells 216 .55 RPM
bodymap2_lymph_node 94 .62 RPM
bodymap2_ovary 128 .29 RPM
bodymap2_kidney 72 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 ortholog_many2many 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 ortholog_one2many 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 ortholog_one2many 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000009627 possible_ortholog 1 retrogene
retro_ecab_651,
Felis catus ENSFCAG00000028482 ortholog_many2many 1 retrogene
retro_fcat_1639,
Homo sapiens ENSG00000187446 within_species_paralog 2 retrogenes
retro_hsap_3334, retro_hsap_3541,
Loxodonta africana ENSLAFG00000022682 ortholog_many2many 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 ortholog_one2many 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 ortholog_many2many 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 ortholog_many2many 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000027562 possible_ortholog 1 retrogene
retro_ocun_272,
Otolemur garnettii ENSOGAG00000034876 ortholog_many2many 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000041941 ortholog_many2many 1 retrogene
retro_ptro_2909,
Rattus norvegicus ENSRNOG00000043210 ortholog_many2many 1 retrogene
retro_rnor_1932,
Sus scrofa ENSSSCG00000022362 possible_ortholog 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 ortholog_many2many 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 ortholog_many2many 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3 84.71 100.00
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Download FASTA sequences of all ENSG00000221823 retrocopies