Parental gene:

ENSOCUG00000027562

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:117944137..117953469(+)


>ENSOCUG00000027562
ACAGGCAATATAACATGGAAAAATCAGTTTTGTTATTATATTGATGCTGATGAAATTAAAAGGCTAGGAAAGAGATTTAA
GAAACTTGATTTGGACAATTCTGGTTCATTGAGTGTGGAGGAGTTCATGTCTCTGCCTGAATTACAACAGAATCCTTTGG
TACAACGAGTAATAGATATATTTGACACAGATGGGAATGGAGAAGTAGACTTTAAAGAATTCATTGAGGGAGTCTCTCAG
TTCAGTGTCAAAGGAGATAAGGAACAGAAGTTGAGGTTTGCTTTCCGTATCTATGACATGGATAAAGATGGCTATATTTC
CAACGGGGAACTCTTCCAGGTGTTAAAGATGATGGTGGGGAACAATCTGAAAGACACACAGTTACAGCAAATTGTAGACA
AAACCATAATAAACGCAGATAAAGATGGAGATGGAAGAATATCCTTTGAGGAATTCTGTGCAGTTGTAGGTGGCCTAGAT
ATCCACAAAAAGATGGTGGTAGACGTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 7 .94 RPM
SRP017611_kidney 12 .47 RPM
SRP017611_brain 112 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 possible_ortholog 1 retrogene
retro_btau_1660,
Choloepus hoffmanni ENSCHOG00000002893 possible_ortholog 1 retrogene
retro_chof_2602,
Callithrix jacchus ENSCJAG00000006498 possible_ortholog 1 retrogene
retro_cjac_624,
Dipodomys ordii ENSDORG00000019760 possible_ortholog 1 retrogene
retro_dord_404,
Equus caballus ENSECAG00000009627 ortholog_many2many 1 retrogene
retro_ecab_651,
Felis catus ENSFCAG00000028482 possible_ortholog 1 retrogene
retro_fcat_1639,
Homo sapiens ENSG00000221823 possible_ortholog 1 retrogene
retro_hsap_3,
Loxodonta africana ENSLAFG00000022682 possible_ortholog 1 retrogene
retro_lafr_1014,
Macaca mulatta ENSMMUG00000017460 possible_ortholog 1 retrogene
retro_mmul_1141,
Mustela putorius furo ENSMPUG00000006250 possible_ortholog 1 retrogene
retro_mputfur_537,
Nomascus leucogenys ENSNLEG00000026538 possible_ortholog 1 retrogene
retro_nleu_1049,
Oryctolagus cuniculus ENSOCUG00000013832 within_species_paralog 1 retrogene
retro_ocun_68,
Otolemur garnettii ENSOGAG00000034876 possible_ortholog 1 retrogene
retro_ogar_1011,
Pan troglodytes ENSPTRG00000041941 possible_ortholog 1 retrogene
retro_ptro_2909,
Rattus norvegicus ENSRNOG00000043210 possible_ortholog 1 retrogene
retro_rnor_1932,
Sus scrofa ENSSSCG00000022362 ortholog_one2many 1 retrogene
retro_sscr_86,
Ictidomys tridecemlineatus ENSSTOG00000025985 possible_ortholog 1 retrogene
retro_itri_1569,
Tarsius syrichta ENSTSYG00000019531 possible_ortholog 2 retrogenes
retro_tsyr_326, retro_tsyr_41,
Tursiops truncatus ENSTTRG00000021395 possible_ortholog 1 retrogene
retro_ttru_382,
Vicugna pacos ENSVPAG00000015522 possible_ortholog 1 retrogene
retro_vpac_3,
Drosophila melanogaster FBgn0015614 ortholog_many2many 1 retrogene
retro_dmel_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_272 80.75 95.27
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Download FASTA sequences of all ENSOCUG00000027562 retrocopies