RetrogeneDB ID: | retro_meug_1799 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold59852:4320..4519(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EXOSC1 | ||
Ensembl ID: | ENSMEUG00000002246 | ||
Aliases: | None | ||
Description: | exosome component 1 [Source:HGNC Symbol;Acc:17286] |
Percent Identity: | 91.04 % |
Parental protein coverage: | 57.39 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LPVVSVTRETESQLLPDVGTIVT-CKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDK |
L.VVSVTRET.SQLLPDVGTIVT..KVSSINSRFAKVHILYVGST.LKNSFRG.IRKEDVRATEKDK | |
Retrocopy | LRVVSVTRETKSQLLPDVGTIVT>SKVSSINSRFAKVHILYVGSTLLKNSFRGIIRKEDVRATEKDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000006477 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000007983 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000005647 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000002246 | 2 retrocopies |
retro_meug_1799 , retro_meug_951,
|
Myotis lucifugus | ENSMLUG00000009228 | 1 retrocopy | |
Mus musculus | ENSMUSG00000034321 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000011898 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000016259 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000003372 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000048708 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000006615 | 1 retrocopy |