Parental gene:

ENSOCUG00000011898

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:18:45647216..45655814(-)


>ENSOCUG00000011898
ATGGCGCCACCTGTAAGGTACTGCATCCCCGGCGAACGTCTGTGTAACTTGGAGGAGGGCAGCCCAGGCAGCGGCACCTA
CACACGGCACGGATACATCTTTTCTTCCCTCGCCGGCTGTCTAACGAAGACCAGCGAGAACGGCGCGCTCCCGGTAGTGT
CTGTGATGAGAGAAGCAGAATCCCAATTACTTCCAGATGTGGGCTCTATTGTAACATGTAAGGTCTCCAGCATCAATTCA
CGTTTTGCCAAAGTACACATCCTCTACGTGGGATCCACACCTCTTAAGAACTCTTTTCGAGGAACTATCCGTAGGAAGGA
AGATGTTCGAGCCACTGAAAAAGACAAGGTTGAAATATACAAGAGTTTCCGTCCAGGGGACATTGTCTTGGCCAAAGTGA
TCTCTCTAGGTGACGCCCAGTCCAACTACCTGCTGACCACAGCTGAAAATGAGCTGGGAGTGGTGGTGGCCCATAGTGAG
TCAGGTGTCCAGATGGTTCCCATCAGCTGGTGTGAGATGCAGTGCCCTAAGACCCACACTAAGGAGTTCCGGAAGGTGGC
CCGCGTGCAGCCTGAATTCTTGCAGACCTAG

Library Parental gene expression (RPM)
SRP017611_liver 3 .24 RPM
SRP017611_kidney 12 .16 RPM
SRP017611_brain 9 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006477 ortholog_one2many 1 retrogene
retro_chof_2075,
Dasypus novemcinctus ENSDNOG00000007983 ortholog_many2many 1 retrogene
retro_dnov_104,
Erinaceus europaeus ENSEEUG00000005647 ortholog_one2many 3 retrogenes
retro_eeur_270, retro_eeur_438, retro_eeur_464,
Macropus eugenii ENSMEUG00000002246 ortholog_one2many 2 retrogenes
retro_meug_1799, retro_meug_951,
Myotis lucifugus ENSMLUG00000009228 ortholog_one2many 1 retrogene
retro_mluc_1563,
Mus musculus ENSMUSG00000034321 ortholog_one2many 1 retrogene
retro_mmus_691,
Otolemur garnettii ENSOGAG00000016259 ortholog_one2many 1 retrogene
retro_ogar_2496,
Pteropus vampyrus ENSPVAG00000003372 ortholog_one2many 1 retrogene
retro_pvam_686,
Rattus norvegicus ENSRNOG00000048708 ortholog_one2many 1 retrogene
retro_rnor_899,
Ictidomys tridecemlineatus ENSSTOG00000006615 ortholog_one2many 1 retrogene
retro_itri_1253,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_173 93.88 100.00
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Download FASTA sequences of all ENSOCUG00000011898 retrocopies