RetrogeneDB ID: | retro_meug_184 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_5317:56011..56382(-) | ||
Located in intron of: | ENSMEUG00000008891 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSMEUG00000003956 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 77.6 % |
Parental protein coverage: | 93.85 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLN |
M..M.VLADALKSI.NAEK.GK.QVLIR.C.KVI.RFLTVMMKHGYIGEF.IIDDHRAGKIVVNL.GRL. | |
Retrocopy | MACMHVLADALKSIYNAEKQGKCQVLIRLCFKVIMRFLTVMMKHGYIGEFDIIDDHRAGKIVVNLMGRLS |
Parental | KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLT-TSAGIMDH--EEARRKHTG |
K.GVISPRFDVQLKDLE.WQNNLLP.R.F.FIV...TSAGIMD......RRK..G | |
Retrocopy | KWGVISPRFDVQLKDLETWQNNLLPTR*F*FIVFK<TSAGIMDRKVKTQRRKNPG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |