RetrogeneDB ID: | retro_tbel_3752 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_150293:71283..71598(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSTBEG00000013626 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 84.76 % |
Parental protein coverage: | 80.77 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLN |
MV.MNVLA.AL.S.NNAEKRGK.Q.LIRPCSKVIV.FLTVMMKHGYIG.FEIIDDHRA.K..VNLTGRLN | |
Retrocopy | MVHMNVLANALNSCNNAEKRGKCQGLIRPCSKVIVQFLTVMMKHGYIGKFEIIDDHRARKVAVNLTGRLN |
Parental | KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLT |
KCGVISPRFDVQLKDLEKW.NNL.PS...GFIVLT | |
Retrocopy | KCGVISPRFDVQLKDLEKWHNNLFPSP*VGFIVLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |