RetrogeneDB ID: | retro_tbel_2921 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_123636:88633..89012(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSTBEG00000013626 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 83.97 % |
Parental protein coverage: | 99.23 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MVRMNVLADALKSINNAEKR-GKRQVLI-RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGR |
MVRMN.LA.ALKSINNAEKR..K...L..RPCS..IV.FLT.M.KHGY.GEFEIIDDHRAGKIVVNLTG. | |
Retrocopy | MVRMNILAGALKSINNAEKR<AKARFLL<RPCSEAIVQFLT-MIKHGYLGEFEIIDDHRAGKIVVNLTGK |
Parental | LNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF |
LNKCGVISPRFDVQLK.LE.WQNNLLPSRQFGFIVLT.SAGIMDH.EARRKHTGG.ILGFF | |
Retrocopy | LNKCGVISPRFDVQLKALETWQNNLLPSRQFGFIVLTASAGIMDH-EARRKHTGGRILGFF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |