RetrogeneDB ID: | retro_tbel_1100 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3846:146153..146493(+) | ||
Located in intron of: | ENSTBEG00000016734 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSTBEG00000013626 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 73.11 % |
Parental protein coverage: | 88.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMK-HGYI-GEFEIIDDHRAGKIVVNLTGR |
MVRMNV.A.ALKS.NNA.KRG.RQ.L.RPCS.V.VRFLTVMMK..G.I..E.EIID.HRA....VNLTGR | |
Retrocopy | MVRMNVPANALKSTNNAGKRGQRQALTRPCSRVLVRFLTVMMK<DGHI<SELEIIDAHRAVRTAVNLTGR |
Parental | LNKCGVI-SPRFDVQLKDLEKW-QNNLLPSRQFGFIVLTTSAGIMDHEE |
LN.CG.I..PRFDV.LKD.EK..QNNLLPS.QFGFI.LTTSA.IM.HEE | |
Retrocopy | LNRCGAI>GPRFDV-LKDQEKG<QNNLLPSPQFGFIALTTSASIMGHEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |