RetrogeneDB ID: | retro_meug_344 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold10341:291..747(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSMEUG00000016770 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 92.11 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITI |
MSL.IPEKFQHILRVLN.NIDG..K.AFAITAI.GVGRRYAHVVLRKA.IDL.KRAGELTEDEVE.VITI | |
Retrocopy | MSLIIPEKFQHILRVLNINIDGWWKTAFAITAIMGVGRRYAHVVLRKANIDLSKRAGELTEDEVECVITI |
Parental | MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG |
MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKI.AHRGLRHFWGLRV.GQHTKTTG | |
Retrocopy | MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIWAHRGLRHFWGLRV*GQHTKTTG |
Parental | RRGRTVGVSKKK |
.RGRTVGVSKKK | |
Retrocopy | HRGRTVGVSKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |