RetrogeneDB ID: | retro_meug_526 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold131210:1560..2214(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PCBP2 | ||
Ensembl ID: | ENSMEUG00000001887 | ||
Aliases: | None | ||
Description: | poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:8648] |
Percent Identity: | 86.28 % |
Parental protein coverage: | 60.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | GARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSL |
GARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL.EDISSSMT.STAASR.PVTL..LVVPASQCGSL | |
Retrocopy | GARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLKEDISSSMTSSTAASRTPVTL<ELVVPASQCGSL |
Parental | IGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY |
IGKGGCKIKEIRESTG.QVQVAG.MLPNSTE.A.TIAGIPQSIIECVKQICVVML.....S..KGV.I.Y | |
Retrocopy | IGKGGCKIKEIRESTGTQVQVAGNMLPNSTEQATTIAGIPQSIIECVKQICVVML----ESLLKGVIIRY |
Parental | RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ |
R.KPSS.PVIFAGGQD.YST.SDSASFPHTTPSMCL..DLEGPPLEAYT.QGQYAIPQPDLTKLHQLA.Q | |
Retrocopy | RSKPSSYPVIFAGGQDGYSTASDSASFPHTTPSMCLILDLEGPPLEAYTVQGQYAIPQPDLTKLHQLAVQ |
Parental | QS-HFP-MTHGNTGFS |
.S..FP.MTHGNT.FS | |
Retrocopy | VS<TFP<MTHGNTRFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |