RetrogeneDB ID: | retro_mluc_2231 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430131:692412..692944(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000024941 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000003975 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.24 % |
Parental protein coverage: | 53.2 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QMFRKTGKLVSLSEQNLVDCSRAQGNKGCRGGLMDNAFQ-YVKDNKGLDTEESYPYSGTDDTCKYKPEFS |
QMF.KTGK.VS.S.QNL.D.S..QGN.GC.GGLMD.AF..Y..D.KGLD.EESY.Y......CK.KP.FS | |
Retrocopy | QMFQKTGKRVSWSGQNLADSS*SQGNEGCDGGLMDDAFY<YAEDSKGLDSEESYAYHVRNESCKNKPGFS |
Parental | AANDTGFVDIHKNERSLMKAVASVGP-ISVALDASLESFQFYEKGIYYDPDCSSEDLNHGVLVVGYGFEG |
AANDTGFVD.H..E..L.KA..SVGP.ISVA...S...FQFY.KGIYY.P.CSS.DL.HGVLVVGYGFEG | |
Retrocopy | AANDTGFVDTHVQEKPLTKA--SVGP<ISVAINVSCRCFQFYAKGIYYEPECSSKDLRHGVLVVGYGFEG |
Parental | VEMDNNKYWIVKNSWGTKWGMDGYIKMAKDLDNHCGIASLASMAS |
.E....KYWIVK...G..WGM..YIKM.KD..NH.GI....S.A. | |
Retrocopy | AEL--HKYWIVKKG-GIAWGMGVYIKMVKDRNNHFGIGTMVSEAT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000019810 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000002168 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000014293 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000016209 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000003975 | 1 retrocopy |
retro_mluc_2231 ,
|
Myotis lucifugus | ENSMLUG00000025440 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000013861 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000002844 | 1 retrocopy | |
Petromyzon marinus | ENSPMAG00000003453 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000002858 | 2 retrocopies |