RetrogeneDB ID: | retro_mluc_2287 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430181:202581..202930(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PERP | ||
Ensembl ID: | ENSMLUG00000001473 | ||
Aliases: | None | ||
Description: | PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] |
Percent Identity: | 51.64 % |
Parental protein coverage: | 61.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | IIALAGRGWLQSSDHIQTSSLWWRCFHEG-GGSGSEADGCQSLMEYAWGRAAAATLFCGFII-LVICFIL |
..ALA..GWL..SDHI..S...WRCF..G.G...S..DG.........G....AT.FCGFI..LV.CF.L | |
Retrocopy | LLALASCGWLRWSDHIPASPR*WRCFRKG>GSGSSR-DGYGASGTTRGGGQPPATCFCGFIT<LVTCFTL |
Parental | S-FFALCGPQ-MLVFLRVIGGLLALAAVFQIISLVIYPVKYTQTFTLHLNPA |
S..FAL.GP...LV..R.IGG.LALAAVF...S.V..P.K..QTF.LH..PA | |
Retrocopy | S<LFALRGPE<VLVLRRAIGGPLALAAVFRTPSSVVCPEKHPQTFRLHCCPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000020097 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000019024 | 1 retrocopy | |
Homo sapiens | ENSG00000112378 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000028340 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000004872 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000013979 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000001473 | 1 retrocopy |
retro_mluc_2287 ,
|
Macaca mulatta | ENSMMUG00000000997 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000014930 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004238 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000011669 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000017043 | 3 retrocopies |