Parental gene:

PERP, ENSBTAG00000020097

Aliases:None
Description:p53 apoptosis effector related to PMP-22 [Source:RefSeq peptide;Acc:NP_001029522]
Organism:Cow (Bos taurus)
Coordinates:9:76937938..76952270(-)


>ENSBTAG00000020097
ATGCTGCGCTGCGGCCTGGCCTGCGAGCGCTGCAGGTGGATCCTGCCGCTGCTACTGCTTAGCGCCATCGTCTTTGACAT
CATCGCGCTGGCCGGCCGCGGCTGGCTGCAGTCGAGCGATGACAGCCAGACGTCCTCGCTGTGGTGGCATTGTTTACTAG
AAGTCTGCGACAGCCTCATGACGTATGCTTGGGGAAGGGCAGCCGCCGCCATGCTGCTCTGCGGTTTCATCATCCTGGTG
ATCTGCTTCATCCTCTCCTTCTTTGCCCTCTGTGGACCCCAAATGCTTGTCTTCCTGAGAGTGATCGGAGGCCTCCTGGC
CCTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCTGTGAAGTACACTCAGACCTTTAACCTTCACCTCAACC
CTGCTGTCACTTACATCTATAACTGGGCCTATGGCTTCGGGTGGGCAGCCACTATTATCCTGATCGGCTGTGCCTTCTTC
TTCTGTTGCCTCCCCAACTATGAAGATGACCTGCTGGGCAATGCCAAGCCCAGGTACTTCTACACATCTGCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 5 .89 RPM
SRP017611_kidney 12 .98 RPM
SRP017611_liver 67 .13 RPM
ERP005899_muscle 102 .99 RPM
ERP005899_liver 114 .34 RPM
SRP030211_testis 1 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019024 ortholog_many2many 1 retrogene
retro_cjac_3992,
Homo sapiens ENSG00000112378 ortholog_one2many 2 retrogenes
retro_hsap_1523, retro_hsap_2901,
Gorilla gorilla ENSGGOG00000028340 ortholog_many2many 1 retrogene
retro_ggor_1165,
Macropus eugenii ENSMEUG00000004872 ortholog_one2many 1 retrogene
retro_meug_845,
Microcebus murinus ENSMICG00000013979 ortholog_one2many 1 retrogene
retro_mmur_353,
Myotis lucifugus ENSMLUG00000001473 ortholog_one2many 1 retrogene
retro_mluc_2287,
Macaca mulatta ENSMMUG00000000997 ortholog_many2many 1 retrogene
retro_mmul_2156,
Nomascus leucogenys ENSNLEG00000014930 ortholog_one2many 2 retrogenes
retro_nleu_1934, retro_nleu_631,
Oryctolagus cuniculus ENSOCUG00000004238 ortholog_many2many 1 retrogene
retro_ocun_170,
Otolemur garnettii ENSOGAG00000011669 ortholog_one2many 1 retrogene
retro_ogar_631,
Pongo abelii ENSPPYG00000017043 ortholog_one2many 3 retrogenes
retro_pabe_1267, retro_pabe_2400, retro_pabe_2416,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_165 98.37 100.00
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Download FASTA sequences of all ENSBTAG00000020097 retrocopies