RetrogeneDB ID: | retro_mluc_2431 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430390:103166..103786(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000002464 | ||
Aliases: | None | ||
Description: | Annexin [Source:UniProtKB/TrEMBL;Acc:G1NXX1] |
Percent Identity: | 61.11 % |
Parental protein coverage: | 61.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 7 |
Parental | QRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMK-GLGTDEDSLIEIICSR |
Q..D.....QRRTK.E.ASA.KSALSGHLE....GLL.TPAQ..AS..KAS...G.GT.E.SL.E.ICSR | |
Retrocopy | QHSDQPQPQQRRTKEEPASAPKSALSGHLEMGVAGLLTTPAQGAASQPKASTE<GAGTEEGSLVEVICSR |
Parental | TNQELQEINRVYK-EMYKTDLEKDIISDTSGDFRKLMVALAKGRRAE-DGSVIDYELIDQ-DARDLYDAG |
..QELQE.N.V...E...T.LEKD.I.DTSGDFRKL.VALAKG.RAE.D.SV..Y.L.DQ..A....DAG | |
Retrocopy | REQELQEANGVHR<ET*ETELEKDLIPDTSGDFRKLVVALAKGGRAE<DDSVMAYGLTDQ<NAPGICDAG |
Parental | VKRKGTDVPKWISIMTERSVFHLQKVFDRYKS-YSPYDMLESIKKEV-KGDLENAFLNLVQCVQ-NKPLY |
VK.KGT.VPK.ISI.T..SV.H.QKV..R......P.DML.SI.KEV..G.LE.AFL.L..C.Q..KPLY | |
Retrocopy | VKGKGTGVPKGISIVTDGSVCHVQKVIGRFSA<CRPSDMLQSIQKEV<PGGLERAFLSLAPCTQ<DKPLY |
Parental | FADRLY |
FAD.LY | |
Retrocopy | FADCLY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000016686 | 3 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000012143 | 3 retrocopies | |
Felis catus | ENSFCAG00000007862 | 2 retrocopies | |
Homo sapiens | ENSG00000182718 | 3 retrocopies | |
Gorilla gorilla | ENSGGOG00000009738 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000008980 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000002464 | 3 retrocopies |
retro_mluc_1569, retro_mluc_2223, retro_mluc_2431 ,
|
Monodelphis domestica | ENSMODG00000011604 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000762 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000011678 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000009952 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000006526 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000007132 | 2 retrocopies | |
Pteropus vampyrus | ENSPVAG00000011401 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000001276 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000003719 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000007888 | 2 retrocopies |