RetrogeneDB ID: | retro_mluc_342 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | AAPE02066543:6009..6957(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000003232 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000000648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.62 % |
Parental protein coverage: | 80.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ARPKSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA |
....SPKEPEQLRKLFIGGLSFETTDESLR.HFEQWG.LTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA | |
Retrocopy | SKSESPKEPEQLRKLFIGGLSFETTDESLRGHFEQWGALTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA |
Parental | MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRG |
MN.RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRG | |
Retrocopy | MNSRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRG |
Parental | SGKKRGFAFVTFDDHDSVDKIVNIVQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGG |
SGKKRGFAF.TF.DHDSVDKIV...QKYHTVNGHNCEVRKALSKQEM.SASSSQRGRSGSGNFGGGRGGG | |
Retrocopy | SGKKRGFAFITFGDHDSVDKIV--IQKYHTVNGHNCEVRKALSKQEMTSASSSQRGRSGSGNFGGGRGGG |
Parental | FGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNG--FGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQ |
FGGNDNFG.GGNFSGRGGFGGSRGG.G.G..G.G..G..FG..G.Y...G...S..S......G...G.. | |
Retrocopy | FGGNDNFGHGGNFSGRGGFGGSRGGSGNGYNGFGNDGSNFGGGGSYNDFGNYNSQSSNVGPMKGGNFGGR |
Parental | GSG-YGGSGSYDSYNNGGGGGGFGGGSGSNFGGG |
.SG.YGG.G.Y.......GG.G.G..S.S..G.G | |
Retrocopy | SSGPYGGGGQYFAKPRNQGGYG-GSSSSSSYGSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000009228 | 7 retrocopies | |
Myotis lucifugus | ENSMLUG00000000648 | 3 retrocopies |
retro_mluc_2503, retro_mluc_342 , retro_mluc_82,
|
Myotis lucifugus | ENSMLUG00000003380 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000007578 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014452 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000004620 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000005735 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000013350 | 1 retrocopy | |
Oreochromis niloticus | ENSONIG00000012248 | 1 retrocopy |