RetrogeneDB - Parental gene ENSONIG00000012248 details

							
>ENSONIG00000012248
ATGTTAGGGAAGGTCCCACGTGAGCCGGAGCAGCTCCGCAAGCTGTTCATCGGAGGCTTGAGCTTCGAGACGACAGACGA

AAGCCTGCGTGCTCATTTTGAGCAATGGGGGACCCTTACAGACTGCGTGGTCATGAGGGACCCCAACAGCAAGCGATCCA

GGGGTTTTGGCTTTGTAACATATTCATCAGTGCAGGAAGTTGATGCTGCCATGTCAGCCCGTCCCCATAAGGTCGATGGA

AGAGTGGTAGAGCCGAAACGAGCGGTTTCCAGGGAGGACTCAAACCGGCCAGGAGCCCACATAACTGTGAAAAAGATCTT

TGTTGGAGGCATCAAAGAAGATACAGAGGAGTCACACCTGAGGGATTATTTCCAGCAGTTTGGCAAAATAGAAGTCATTG

ATATCATGACTGACCGCAACACTGGGAAGAAGAGGGGCTTTGCCTTTGTTACGTTTGATGACCACGATTCAGTTGATAGG

ATTGTCATCCAGAAATACCACACTATCAACTCTCACAACTGTGAGGTGAGGAAGGCCCTCACAAAGCAGGAAATGCAGAG

TGCGGGAATGGGTATGGGAATGAGAGGAGGTCGCAACACTGGTGGCAGGCCCTACGATTACGACAGGGGCTTCAATCAAG

GTATGGCTTATTTTGTTGATGGTGGATTAGGTGGCAGAGGGCGATATGGAGATGGTCCTTACAATTGCAACGGAAGTGAT

GGTGATTTAGGCTATGGAGGCGGACCTGGTGGTCCTGGTGGCTATAATGGAGGTAACCGTGGTTACAACCAGGGCTACAA

CCAGGGTGGTGGATATGGAGGAAATGGTTATGACAGCAATGGTTATGGCAATTGTGGTGGTGGTGGAGGCGGCGGTGGCG

GCAATAACTACAACAACATGGGCCACTACGACCCCCAGGCCTCTAACTTTGGCCCCATGAAGGGCAACTTTGGTGGCGGC

GGCGGCGGCAGGAACTTTGGTGGATACGGAGGCTCAAACAACAGTGGCTATGGACGTCCAGGACGATTTTAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000000717	ortholog_one2many	3 retrogenes	retro_amel_1726, retro_amel_547, retro_amel_925,
Bos taurus	ENSBTAG00000001553	ortholog_one2many	20 retrogenes	retro_btau_1019, retro_btau_1065, retro_btau_1268, retro_btau_1378, retro_btau_1379, retro_btau_1437, retro_btau_1455, retro_btau_1657, retro_btau_1673, retro_btau_283, retro_btau_337, retro_btau_403, retro_btau_462, retro_btau_516, retro_btau_519, retro_btau_589, retro_btau_602, retro_btau_677, retro_btau_715, retro_btau_822,
Canis familiaris	ENSCAFG00000006580	ortholog_one2many	16 retrogenes	retro_cfam_1080, retro_cfam_1081, retro_cfam_1170, retro_cfam_1323, retro_cfam_1616, retro_cfam_1844, retro_cfam_2017, retro_cfam_2128, retro_cfam_360, retro_cfam_564, retro_cfam_702, retro_cfam_803, retro_cfam_839, retro_cfam_855, retro_cfam_892, retro_cfam_937,
Cavia porcellus	ENSCPOG00000020972	ortholog_one2many	1 retrogene	retro_cpor_1078,
Dasypus novemcinctus	ENSDNOG00000009228	ortholog_one2many	7 retrogenes	retro_dnov_1059, retro_dnov_1670, retro_dnov_1944, retro_dnov_2081, retro_dnov_250, retro_dnov_320, retro_dnov_374,
Equus caballus	ENSECAG00000008676	ortholog_one2many	1 retrogene	retro_ecab_74,
Felis catus	ENSFCAG00000010150	ortholog_one2many	9 retrogenes	retro_fcat_1574, retro_fcat_1742, retro_fcat_1867, retro_fcat_382, retro_fcat_474, retro_fcat_712, retro_fcat_781, retro_fcat_844, retro_fcat_888,
Homo sapiens	ENSG00000135486	ortholog_one2many	57 retrogenes	retro_hsap_1021, retro_hsap_1042, retro_hsap_1082, retro_hsap_1240, retro_hsap_1276, retro_hsap_1282, retro_hsap_1287, retro_hsap_1481, retro_hsap_158, retro_hsap_1584, retro_hsap_1613, retro_hsap_1638, retro_hsap_1711, retro_hsap_1899, retro_hsap_1933, retro_hsap_2002, retro_hsap_2029, retro_hsap_2091, retro_hsap_2096, retro_hsap_2197, retro_hsap_2347, retro_hsap_2379, retro_hsap_2636, retro_hsap_2640, retro_hsap_2668, retro_hsap_2718, retro_hsap_2857, retro_hsap_291, retro_hsap_2917, retro_hsap_2944, retro_hsap_3049, retro_hsap_3055, retro_hsap_332, retro_hsap_3343, retro_hsap_3393, retro_hsap_3432, retro_hsap_3439, retro_hsap_3449, retro_hsap_3549, retro_hsap_3745, retro_hsap_3756, retro_hsap_3757, retro_hsap_394, retro_hsap_3979, retro_hsap_4011, retro_hsap_4084, retro_hsap_414, retro_hsap_4218, retro_hsap_4282, retro_hsap_437, retro_hsap_4747, retro_hsap_482, retro_hsap_4883, retro_hsap_668, retro_hsap_84, retro_hsap_845, retro_hsap_924,
Gorilla gorilla	ENSGGOG00000003040	ortholog_one2many	6 retrogenes	retro_ggor_1006, retro_ggor_1010, retro_ggor_1221, retro_ggor_1738, retro_ggor_2041, retro_ggor_950,
Loxodonta africana	ENSLAFG00000029587	ortholog_one2many	5 retrogenes	retro_lafr_1202, retro_lafr_1208, retro_lafr_192, retro_lafr_747, retro_lafr_961,
Myotis lucifugus	ENSMLUG00000000648	ortholog_one2many	3 retrogenes	retro_mluc_2503, retro_mluc_342, retro_mluc_82,
Macaca mulatta	ENSMMUG00000012989	ortholog_one2many	5 retrogenes	retro_mmul_1031, retro_mmul_1427, retro_mmul_1726, retro_mmul_187, retro_mmul_1871,
Mustela putorius furo	ENSMPUG00000004620	ortholog_one2many	1 retrogene	retro_mputfur_34,
Mustela putorius furo	ENSMPUG00000005735	ortholog_one2many	2 retrogenes	retro_mputfur_1378, retro_mputfur_653,
Mus musculus	ENSMUSG00000046434	ortholog_one2many	3 retrogenes	retro_mmus_1861, retro_mmus_410, retro_mmus_543,
Nomascus leucogenys	ENSNLEG00000017659	ortholog_one2many	34 retrogenes	retro_nleu_1011, retro_nleu_1090, retro_nleu_1257, retro_nleu_130, retro_nleu_132, retro_nleu_1497, retro_nleu_1630, retro_nleu_1648, retro_nleu_166, retro_nleu_167, retro_nleu_1695, retro_nleu_1739, retro_nleu_1774, retro_nleu_1802, retro_nleu_1875, retro_nleu_190, retro_nleu_2040, retro_nleu_2222, retro_nleu_2304, retro_nleu_2324, retro_nleu_2378, retro_nleu_2690, retro_nleu_2742, retro_nleu_2852, retro_nleu_32, retro_nleu_366, retro_nleu_458, retro_nleu_587, retro_nleu_601, retro_nleu_645, retro_nleu_648, retro_nleu_708, retro_nleu_825, retro_nleu_987,
Oryctolagus cuniculus	ENSOCUG00000013350	ortholog_one2many	1 retrogene	retro_ocun_1675,
Otolemur garnettii	ENSOGAG00000029707	ortholog_one2many	3 retrogenes	retro_ogar_1721, retro_ogar_205, retro_ogar_2321,
Ochotona princeps	ENSOPRG00000006107	ortholog_one2one	10 retrogenes	retro_opri_1183, retro_opri_338, retro_opri_349, retro_opri_424, retro_opri_456, retro_opri_597, retro_opri_753, retro_opri_782, retro_opri_79, retro_opri_843,
Procavia capensis	ENSPCAG00000001867	ortholog_one2one	5 retrogenes	retro_pcap_111, retro_pcap_162, retro_pcap_377, retro_pcap_424, retro_pcap_435,
Pongo abelii	ENSPPYG00000025850	ortholog_one2many	4 retrogenes	retro_pabe_1765, retro_pabe_2285, retro_pabe_3492, retro_pabe_3835,
Pteropus vampyrus	ENSPVAG00000000322	ortholog_one2one	9 retrogenes	retro_pvam_1133, retro_pvam_1230, retro_pvam_1313, retro_pvam_1370, retro_pvam_196, retro_pvam_300, retro_pvam_453, retro_pvam_643, retro_pvam_859,
Rattus norvegicus	ENSRNOG00000036839	ortholog_one2many	17 retrogenes	retro_rnor_1001, retro_rnor_1322, retro_rnor_1658, retro_rnor_1770, retro_rnor_1786, retro_rnor_1846, retro_rnor_1987, retro_rnor_2194, retro_rnor_2482, retro_rnor_2551, retro_rnor_2619, retro_rnor_2657, retro_rnor_2881, retro_rnor_2944, retro_rnor_2945, retro_rnor_2965, retro_rnor_2969,
Sus scrofa	ENSSSCG00000000288	ortholog_one2many	3 retrogenes	retro_sscr_354, retro_sscr_355, retro_sscr_861,
Ictidomys tridecemlineatus	ENSSTOG00000006551	ortholog_one2many	8 retrogenes	retro_itri_1291, retro_itri_1567, retro_itri_190, retro_itri_354, retro_itri_439, retro_itri_446, retro_itri_456, retro_itri_515,
Tupaia belangeri	ENSTBEG00000008238	ortholog_one2many	30 retrogenes	retro_tbel_1219, retro_tbel_156, retro_tbel_162, retro_tbel_1643, retro_tbel_1830, retro_tbel_1967, retro_tbel_2192, retro_tbel_2195, retro_tbel_2211, retro_tbel_2330, retro_tbel_261, retro_tbel_2666, retro_tbel_2673, retro_tbel_2703, retro_tbel_276, retro_tbel_2774, retro_tbel_2787, retro_tbel_2970, retro_tbel_3473, retro_tbel_3976, retro_tbel_3995, retro_tbel_4266, retro_tbel_4271, retro_tbel_453, retro_tbel_4653, retro_tbel_4729, retro_tbel_692, retro_tbel_70, retro_tbel_79, retro_tbel_839,
Tursiops truncatus	ENSTTRG00000004505	ortholog_one2one	27 retrogenes	retro_ttru_1202, retro_ttru_1223, retro_ttru_1251, retro_ttru_1331, retro_ttru_1362, retro_ttru_156, retro_ttru_157, retro_ttru_1678, retro_ttru_1732, retro_ttru_1806, retro_ttru_1813, retro_ttru_1874, retro_ttru_221, retro_ttru_311, retro_ttru_479, retro_ttru_599, retro_ttru_605, retro_ttru_607, retro_ttru_620, retro_ttru_63, retro_ttru_678, retro_ttru_708, retro_ttru_812, retro_ttru_882, retro_ttru_902, retro_ttru_926, retro_ttru_981,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_onil_38	56.45	54.23	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSONIG00000012248 retrocopies

Parental gene:	zgc:66127, ENSONIG00000012248
Aliases:	None
Description:	zgc:66127 [Source:ZFIN;Acc:ZDB-GENE-040426-1546]
Organism:	*Tilapia (Oreochromis niloticus)*
Coordinates:	GL831196.1:1867905..1869992(+)

Parental gene:

zgc:66127, ENSONIG00000012248