RetrogeneDB ID: | retro_mluc_629 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:12198240..12198868(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GSTP1 | ||
Ensembl ID: | ENSMLUG00000011529 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.21 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VAPYTIVYFPVRGRCEATRMLLADQGQSWKEEVVTKDTWMQGTLKASCLYGQLPKFQDGDLTLYQSNAIL |
..PYTI..FP.RG.CEAT.MLLADQGQSWKEEVVTK.TW.QG.LKASCLYG.LPKFQDGDLTLYQSNAIL | |
Retrocopy | MVPYTIICFPIRGHCEATHMLLADQGQSWKEEVVTKETWLQGSLKASCLYGKLPKFQDGDLTLYQSNAIL |
Parental | RHLGRSLGLYGKDQREAALVDVV-NDGVEDLRCKYATLIYTNYEAGKEDYVKELPGRLKPFETLLSQNQ- |
.HLGRSLGLYGKDQREAALV.VV..DGVEDLRCKYATLIYTNYEAGKEDYVKELPG.LKPFETLLSQNQ. | |
Retrocopy | *HLGRSLGLYGKDQREAALVNVV<EDGVEDLRCKYATLIYTNYEAGKEDYVKELPGCLKPFETLLSQNQ< |
Parental | GGQAFIVGNQISFADYNLLDLLLIHQVLAPGCLDSLPLLSAYVSRLSARPKLKAFLASPEHVNRPINGNG |
G.QAFI.GNQISF.DYNLLDLLLIHQVLAPGCLDSLPLLSA.VS.LSA.PKLKAFLAS.EHVN.PINGNG | |
Retrocopy | GAQAFIMGNQISFTDYNLLDLLLIHQVLAPGCLDSLPLLSACVSHLSAQPKLKAFLASLEHVNCPINGNG |
Parental | KQ |
KQ | |
Retrocopy | KQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000001020 | 3 retrocopies | |
Canis familiaris | ENSCAFG00000011349 | 4 retrocopies | |
Macropus eugenii | ENSMEUG00000001519 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000011529 | 4 retrocopies | |
Mustela putorius furo | ENSMPUG00000004029 | 2 retrocopies | |
Mus musculus | ENSMUSG00000038155 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000018237 | 4 retrocopies |