RetrogeneDB ID: | retro_mmur_1221 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_33923:4795..5325(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GEMIN2 | ||
Ensembl ID: | ENSMICG00000004811 | ||
Aliases: | None | ||
Description: | gem (nuclear organelle) associated protein 2 [Source:HGNC Symbol;Acc:10884] |
Percent Identity: | 90.61 % |
Parental protein coverage: | 63.57 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | NMAWVPAESAVEELMP-RLLPV-EPCDLTEAFDPSVPPRTPQEYLRRVQIEAAQCPDVVVAQIDPKKLKR |
.MAW..AESAV.E..P.RLLPV.E.CDLTEAF.PSVP.RTPQEYLRRVQIEAAQCPDVVVAQIDPKKLKR | |
Retrocopy | SMAWLLAESAVDESIP<RLLPV<EHCDLTEAFYPSVPLRTPQEYLRRVQIEAAQCPDVVVAQIDPKKLKR |
Parental | KQSVNISLSGCQPAPEGYSPTLQWQQQQVAQFSTVRQSVNKHRSHWKSQQ-LDSNVTMPKSEDEEGWKKF |
KQSVNISLSGCQPAPEGYSPT.QW.Q.QVAQFSTVRQSVNKHRSHWKSQQ.LDSNVTMPKSEDEE.WKKF | |
Retrocopy | KQSVNISLSGCQPAPEGYSPTFQW-Q*QVAQFSTVRQSVNKHRSHWKSQQ>LDSNVTMPKSEDEERWKKF |
Parental | CLGERLCAEGAIGPATNESPGIDYVQIGFPPLLSIVSRMNQ |
CLGERLCAEGAIGPAT.ESPGIDYVQIGFPPLLSIVSRMNQ | |
Retrocopy | CLGERLCAEGAIGPATYESPGIDYVQIGFPPLLSIVSRMNQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000016248 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000018278 | 1 retrocopy | |
Homo sapiens | ENSG00000092208 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000016691 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000004811 | 1 retrocopy |
retro_mmur_1221 ,
|
Myotis lucifugus | ENSMLUG00000002619 | 1 retrocopy | |
Mus musculus | ENSMUSG00000060121 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000005764 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000006291 | 1 retrocopy |