RetrogeneDB ID: | retro_mmur_482 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_3414:148925..149672(-) | ||
Located in intron of: | ENSMICG00000000792 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMICG00000008789 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.49 % |
Parental protein coverage: | 63.22 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGG |
YYD.LGVK..A..EE.KKAYRKLA.KYHPDKNP.EGEKFK.ISQAYEVLSD.KKR..YD..GEQAIKE.G | |
Retrocopy | YYDVLGVKCNATHEELKKAYRKLAMKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKRGEQAIKESG |
Parental | SGGPSFSSPMDIFDMFFGGGGRMARERRGKNVVHQLSVT-LEDLYNGVTK-KLALQKNVICEKCEGIGGK |
.GG..F.SPMDIF.MFFGG.GRM.RE.RGKNVVHQLSVT.LEDLYNG.T..KLALQKNVI..KCEG.GGK | |
Retrocopy | AGG-GFGSPMDIFGMFFGGRGRMQRESRGKNVVHQLSVT<LEDLYNGATR>KLALQKNVIYDKCEG*GGK |
Parental | KGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCVECKGQGERINPKDRCESCSGAKVIREKKIIEVHVE |
KG.VE.CP.C.G.GMQI.I.QIGPGMVQQIQ.VC.EC.G.GERI.PKDRC.S..G.K...EKKI.E.H.. | |
Retrocopy | KGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSSNGRKIVQEKKILEAHID |
Parental | KGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGH |
KGMKDGQKI.FH.EGDQEP.LEPGD.IIVLDQKDH..F...GH | |
Retrocopy | KGMKDGQKITFHVEGDQEPGLEPGDIIIVLDQKDHA-FHVYGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000012576 | 1 retrocopy | |
Dipodomys ordii | ENSDORG00000005972 | 4 retrocopies | |
Echinops telfairi | ENSETEG00000004320 | 4 retrocopies | |
Macropus eugenii | ENSMEUG00000015982 | 4 retrocopies | |
Microcebus murinus | ENSMICG00000008789 | 6 retrocopies | |
Mus musculus | ENSMUSG00000032285 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000006752 | 5 retrocopies | |
Ochotona princeps | ENSOPRG00000007594 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000009268 | 9 retrocopies | |
Tarsius syrichta | ENSTSYG00000008600 | 1 retrocopy |