RetrogeneDB ID: | retro_mmur_719 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_4824:329508..329943(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSMICG00000014754 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 74. % |
Parental protein coverage: | 91.25 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGR-VYNVTQ |
.TNT.GKRRG...MFSRPFRKHGV..LATY..IYK.GD..DIKGMGTVQKGMPH.C.HGK.GR.VY.VTQ | |
Retrocopy | ITNTEGKRRGSCCMFSRPFRKHGVTLLATYTQIYKIGDVADIKGMGTVQKGMPHRCHHGKAGRKVYAVTQ |
Parental | HAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSF---LKRVKENDQKKKEAKEKGTWVQLKRQPAPPR |
.AVGI.VNK.VKGKILAK.INVRIEHI.HS.S.DSF...LK.VKENDQK.KEA.EKGT.VQ....PAPPR | |
Retrocopy | RAVGIAVNK-VKGKILAK*INVRIEHINHSES*DSFYSFLKYVKENDQKEKEAGEKGTQVQ----PAPPR |
Parental | EAHFVRTNGK |
EA..VRT..K | |
Retrocopy | EARCVRTSEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |