RetrogeneDB ID: | retro_mmur_74 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_1098:10606..10918(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ERH | ||
Ensembl ID: | ENSMICG00000009623 | ||
Aliases: | None | ||
Description: | enhancer of rudimentary homolog (Drosophila) [Source:HGNC Symbol;Acc:3447] |
Percent Identity: | 85.58 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSHTISLVQPTKRPEGRTYADYESVNE-MEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCL |
.SHTI.LVQPTKRPEGRTYA.YESVNE.MEGVCK.YEEHLKRMNPNSPSITYDI.QLF.FIDDLADLSCL | |
Retrocopy | VSHTILLVQPTKRPEGRTYAYYESVNECMEGVCKVYEEHLKRMNPNSPSITYDIGQLFEFIDDLADLSCL |
Parental | VC-ADTQTYQLYNRDWIKRKIYVLFRRQAQQARK |
V..ADTQTYQ.YN.DWIK.KIYVL..RQAQ.ARK | |
Retrocopy | VYRADTQTYQPYNKDWIKEKIYVLLCRQAQ*ARK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000014940 | 2 retrocopies | |
Equus caballus | ENSECAG00000019178 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000004751 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000009623 | 1 retrocopy |
retro_mmur_74 ,
|
Myotis lucifugus | ENSMLUG00000011879 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000001514 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004636 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000006482 | 2 retrocopies | |
Sorex araneus | ENSSARG00000005558 | 11 retrocopies |