RetrogeneDB ID: | retro_mputfur_829 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896953.1:64624..65508(+) | ||
Located in intron of: | ENSMPUG00000015481 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000010339 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.36 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | MSLYPSLEDLKV-DKVIQAQTAFSANPGNPAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIRAN |
MSL.PSLEDLKV..KVIQAQTAFSANPGNPAILSEASAPISQD.NLYP.L..ELSQYMGLSL.EE.I.A. | |
Retrocopy | MSLCPSLEDLKV<NKVIQAQTAFSANPGNPAILSEASAPISQDRNLYPRLSLELSQYMGLSLSEEQICAP |
Parental | MAVVPGAPVQGQLVARPSSMNYMVA-PVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFV |
MA..PGAP.QGQL.ARPS.MN.MVA.PVTGNDVG.RR.E.KQG.REVILCKDQDGKIGL.LKS.DNGIFV | |
Retrocopy | MALGPGAPGQGQLAARPSGMNPMVA<PVTGNDVGTRRTEMKQGTREVILCKDQDGKIGLGLKSVDNGIFV |
Parental | QLVQANSPASLVGLR-FGDQVLQINGEN-CAGWSSDKAHKVLKQAFGEKITMTVRDRPFE-RTVTMHKDS |
Q.VQANSPASLVGLR..GDQVLQI.GE..CAGWS..KAH.V.K.AFGE.IT.TV.DRPF..R.VTMH.D. | |
Retrocopy | QPVQANSPASLVGLR<IGDQVLQISGES<CAGWSAGKAHEVPKRAFGEQITRTVHDRPFV<RRVTMHDDG |
Parental | TGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEVNGQNVIGLKDSQIADILSTSETVVTITIMPAFIF |
TGH.GFIFK.G...............LLTE..ICEVNGQNV.GL...Q.AD..STSET.VT.T....F.F | |
Retrocopy | TGHAGFIFKDGGRSPPQ*KTVLQPESLLTERHICEVNGQNVTGLEGAQVADAPSTSETAVTMT-HACFYF |
Parental | -EHIIKRMAPSIMKSLMDHTIPEV |
.EH.IKRMAPS.MKSL.DHT.PEV | |
Retrocopy | >EH-IKRMAPSSMKSLTDHTFPEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006161 | 1 retrocopy | |
Bos taurus | ENSBTAG00000019910 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000007112 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000003565 | 5 retrocopies | |
Equus caballus | ENSECAG00000015053 | 1 retrocopy | |
Homo sapiens | ENSG00000137575 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000009019 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000010757 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000003968 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000004807 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000017296 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000010339 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000001408 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000013462 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000016432 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000018612 | 3 retrocopies | |
Pan troglodytes | ENSPTRG00000020277 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000013965 | 1 retrocopy |