RetrogeneDB ID: | retro_mputfur_968 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896982.1:4455690..4456059(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZNRD1 | ||
Ensembl ID: | ENSMPUG00000007474 | ||
Aliases: | None | ||
Description: | zinc ribbon domain containing 1 [Source:HGNC Symbol;Acc:13182] |
Percent Identity: | 72.36 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MDGARSGSRFQSDLDFCPDCGSVLPLPGAQDTVTCVRCAFRVPVRDFEGRAVSSCVVFNKPGTAAPAPAE |
MD.A.S.SRFQSDLD.CPDCGS.LPLPGAQDTVTCV.C.FR.P..DF.G..V..CV.FNK.GTA.P...E | |
Retrocopy | MDHA*SSSRFQSDLDLCPDCGSLLPLPGAQDTVTCVCCGFRIPMQDFKGKVVNTCVMFNKLGTAVPVSVE |
Parental | EGPEFQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTRCRFQEKEDS |
EG.EFQGPVV.RRC.RC.H.GMA.HTRQM.SA.EG.T.F.TCT.CRF.EKEDS | |
Retrocopy | EGFEFQGPVVERRCSRCAHKGMA*HTRQMCSASEGHTIFNTCTNCRFLEKEDS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000007328 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000015720 | 9 retrocopies | |
Myotis lucifugus | ENSMLUG00000007272 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000016023 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000007474 | 1 retrocopy |
retro_mputfur_968 ,
|
Rattus norvegicus | ENSRNOG00000000779 | 1 retrocopy | |
Sorex araneus | ENSSARG00000009716 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000001554 | 1 retrocopy |