RetrogeneDB ID: | retro_nleu_666 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397269.1:15955277..15955558(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KIAA1143 | ||
Ensembl ID: | ENSNLEG00000005987 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.04 % |
Parental protein coverage: | 61.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RPAEPAFLARFKERVGHREGPTVETKRIQPQ-PPDEDRDHSDKEDEQPQVVVLKKGDLSVEEVMKIKAEI |
RPAEPAFLARFKE.VG....PT.ETKRIQP...PDE..DHSDK.DE.PQV.V.KKGDLSVEEVMKIKAE. | |
Retrocopy | RPAEPAFLARFKEWVGYKKEPTIETKRIQPH<SPDENGDHSDK-DEEPQVMVFKKGDLSVEEVMKIKAEV |
Parental | KAAKADEEPAPADGRIIYRKPVKHPS |
KAAKAD.E.A.A.GRI.Y.KPVKH.S | |
Retrocopy | KAAKADKELARAEGRITYQKPVKHQS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000014132 | 1 retrocopy | |
Homo sapiens | ENSG00000163807 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005987 | 1 retrocopy |
retro_nleu_666 ,
|
Oryctolagus cuniculus | ENSOCUG00000000929 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000013954 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000014824 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000012438 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000011308 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000010817 | 1 retrocopy |