Parental gene: | KIAA1143, ENSSSCG00000011308 |
| Aliases: | None |
| Description: | KIAA1143 [Source:HGNC Symbol;Acc:29198] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 13:30802225..30809867(-) |
>ENSSSCG00000011308
ATGAGCAAGCGGAACCAGGTGTCCTACGTGCGGCCAGCCGAACCGGCTTTCCTGGCCCGCTTCAAGGAACGAGTCGGCTA
CAGGGAAGGGCCCACCATAGAGACGAAGAGAATCCAGCCTCAGCTCCCAGATGAAGATGCTGATCACAGTGACAAAGAAG
ATGAACAGCCCCAAGTGGTGGTTTTAAAAAAAGGAGACCTGTCCGAAGAGGTCATGAAAATTAAAGCAGAAATAAAGGCT
GCTAAAGCAGATGAAGAACCAGCTTCAGCTGATGGAAGAATCATGTATCGAAAACCAGTCAAGCGTTCCTCGGATGAAAA
GTATTCAGGTTTAACAGCAAGCTCAAAAAAGAAGAAGACAAATGAAGAAGATGTAATAAATAAGCAGGACTCGGTTAAAA
AGAACTCACAAAAACAAATCAGAAACAGTAGCCTCCTTTCTTTTGACAATGAAGATGAAAATGATTAA
ATGAGCAAGCGGAACCAGGTGTCCTACGTGCGGCCAGCCGAACCGGCTTTCCTGGCCCGCTTCAAGGAACGAGTCGGCTA
CAGGGAAGGGCCCACCATAGAGACGAAGAGAATCCAGCCTCAGCTCCCAGATGAAGATGCTGATCACAGTGACAAAGAAG
ATGAACAGCCCCAAGTGGTGGTTTTAAAAAAAGGAGACCTGTCCGAAGAGGTCATGAAAATTAAAGCAGAAATAAAGGCT
GCTAAAGCAGATGAAGAACCAGCTTCAGCTGATGGAAGAATCATGTATCGAAAACCAGTCAAGCGTTCCTCGGATGAAAA
GTATTCAGGTTTAACAGCAAGCTCAAAAAAGAAGAAGACAAATGAAGAAGATGTAATAAATAAGCAGGACTCGGTTAAAA
AGAACTCACAAAAACAAATCAGAAACAGTAGCCTCCTTTCTTTTGACAATGAAGATGAAAATGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 1 .59 RPM |
| SRP014902_testis | 4 .38 RPM |
| SRP018856_adipose | 4 .34 RPM |
| SRP018288_kidney | 5 .12 RPM |
| SRP018288_lung | 2 .95 RPM |
| SRP018288_liver | 2 .88 RPM |
| SRP018288_heart | 6 .94 RPM |
| SRP035408_liver | 5 .96 RPM |
| SRP035408_brain | 16 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014132 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000163807 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005987 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000929 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000013954 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014824 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000012438 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010817 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_844 | 65.91 | 82.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_874 | 65.91 | 82.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000011308 retrocopies