RetrogeneDB ID: | retro_ogar_514 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:23260307..23260700(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZFAND1 | ||
Ensembl ID: | ENSOGAG00000009813 | ||
Aliases: | None | ||
Description: | zinc finger, AN1-type domain 1 [Source:HGNC Symbol;Acc:25858] |
Percent Identity: | 72.14 % |
Parental protein coverage: | 51.49 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | FLPFICDGCSGIFCLEHRSKES-HGCPEVTIINERLKTDNHKSYPCSFKDCGERELVAVLCPYCEKNFCL |
FLPFICD...GI..LEHRSKE.....PEVTIINE.LKTD.HKSYPC.FKDC.EREL.AV...YC..NFCL | |
Retrocopy | FLPFICD---GILYLEHRSKEF<YDFPEVTIINEKLKTDEHKSYPC*FKDCVERELAAVT*SYCG-NFCL |
Parental | RHRHQSDHECEKLEIPKPRMAATQKLVKDIIDSKTGETTSKR-RKGAKNSQTAAKVALMKLKMHADGDKS |
RH.HQSDHEC.KLEI.KP..AATQKL.KDII.SKT...TSKR..KGAKNS.TA.K..LMKLK.HADG..S | |
Retrocopy | RHYHQSDHECKKLEILKPHIAATQKLLKDIIESKT---TSKR>KKGAKNSETATKIPLMKLKIHADGGDS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000014075 | 1 retrocopy | |
Homo sapiens | ENSG00000104231 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000023665 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000016889 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000002626 | 1 retrocopy | |
Mus musculus | ENSMUSG00000039795 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002584 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000009813 | 2 retrocopies |
retro_ogar_2608, retro_ogar_514 ,
|
Tupaia belangeri | ENSTBEG00000015393 | 1 retrocopy |