RetrogeneDB ID: | retro_pvam_660 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_599:465581..465924(-) | ||
Located in intron of: | ENSPVAG00000001192 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSPVAG00000016402 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 82.2 % |
Parental protein coverage: | 98.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | FKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKDKNLKVKGPVRMPTKTLRITTRKT-PCG |
FKDT.KTPVEPEV.IH.IRIT.TS..VKSLEKVCAD.IRGA.DKNLKV.GPV.MPTKTLR..TRK..P.. | |
Retrocopy | FKDTRKTPVEPEVVIH*IRITPTSCDVKSLEKVCADWIRGAEDKNLKVRGPVQMPTKTLR-STRKS>PWR |
Parental | EGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA |
EGSKTWDRFQMRIHKRLIDLHSPSEIVKQI.SISI..GVE.EVT.ADA | |
Retrocopy | EGSKTWDRFQMRIHKRLIDLHSPSEIVKQINSISI--GVEAEVTTADA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |