Parental gene:

MMU.1663, ENSMMUG00000021314

Aliases:None
Description:ribosomal protein S20 [Source:RefSeq peptide;Acc:NP_001244182]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:8:58676529..58677945(-)


>ENSMMUG00000021314
GCTTTTAAGGATACTGGAAAAACACCCGTGGAGCCGGAGGTGGCAATTCACCGAATTCGAATCACCCTAACGAGCCGCAA
CGTTAAATCCCTGGAAAAGGTGTGTGCTGACTTGATCAGAGGCGCGAAGGAAAAGAACCTGAAAGTGAAAGGACCAGTTC
GAATGCCTACCAAGACTTTGAGAATCACTACAAGAAAAACTCCTTGTGGTGAAGGTTCTAAGACATGGGATCGTTTCCAG
ATGAGAATCCACAAGCGACTCATTGACTTGCACAGTCCTTCTGAGATTGTTAAGCAGATTACTTCCATCAGTATTGAGCC
AGGAGTTGAGGTGGAAGTCACCATTGCAGATGCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 50 .42 RPM
SRP007412_brain_prefrontal_cortex 109 .08 RPM
SRP007412_cerebellum 43 .98 RPM
SRP007412_heart 160 .99 RPM
SRP007412_kidney 110 .68 RPM
SRP007412_liver 87 .44 RPM
SRP007412_testis 81 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006087 ortholog_one2many 17 retrogenes
retro_amel_1067, retro_amel_1142, retro_amel_1146, retro_amel_1245, retro_amel_1405, retro_amel_1409, retro_amel_1442, retro_amel_1579, retro_amel_1619, retro_amel_1825, retro_amel_281, retro_amel_299, retro_amel_437, retro_amel_495, retro_amel_599, retro_amel_709, retro_amel_98,
Cavia porcellus ENSCPOG00000011697 possible_ortholog 10 retrogenes
retro_cpor_1002, retro_cpor_1016, retro_cpor_1064, retro_cpor_1104, retro_cpor_1507, retro_cpor_404, retro_cpor_499, retro_cpor_533, retro_cpor_544, retro_cpor_717,
Loxodonta africana ENSLAFG00000002515 possible_ortholog 8 retrogenes
retro_lafr_353, retro_lafr_378, retro_lafr_537, retro_lafr_719, retro_lafr_730, retro_lafr_851, retro_lafr_865, retro_lafr_880,
Macropus eugenii ENSMEUG00000014171 ortholog_one2many 21 retrogenes
retro_meug_100, retro_meug_1015, retro_meug_1058, retro_meug_1170, retro_meug_1313, retro_meug_1614, retro_meug_1702, retro_meug_1761, retro_meug_1777, retro_meug_1831, retro_meug_1911, retro_meug_1951, retro_meug_2065, retro_meug_2110, retro_meug_2187, retro_meug_659, retro_meug_710, retro_meug_723, retro_meug_818, retro_meug_892, retro_meug_928,
Myotis lucifugus ENSMLUG00000029059 ortholog_one2many 2 retrogenes
retro_mluc_1187, retro_mluc_546,
Monodelphis domestica ENSMODG00000009114 ortholog_one2many 6 retrogenes
retro_mdom_1701, retro_mdom_1735, retro_mdom_1738, retro_mdom_1814, retro_mdom_1817, retro_mdom_1943,
Mustela putorius furo ENSMPUG00000010452 possible_ortholog 15 retrogenes
retro_mputfur_1094, retro_mputfur_1188, retro_mputfur_1313, retro_mputfur_1366, retro_mputfur_1374, retro_mputfur_1432, retro_mputfur_238, retro_mputfur_249, retro_mputfur_320, retro_mputfur_418, retro_mputfur_424, retro_mputfur_433, retro_mputfur_620, retro_mputfur_77, retro_mputfur_819,
Nomascus leucogenys ENSNLEG00000001214 possible_ortholog 19 retrogenes
retro_nleu_1013, retro_nleu_1343, retro_nleu_1447, retro_nleu_1566, retro_nleu_1794, retro_nleu_1798, retro_nleu_1805, retro_nleu_1818, retro_nleu_2059, retro_nleu_2159, retro_nleu_2654, retro_nleu_2659, retro_nleu_2750, retro_nleu_2786, retro_nleu_2819, retro_nleu_2843, retro_nleu_3066, retro_nleu_382, retro_nleu_41,
Pteropus vampyrus ENSPVAG00000016402 ortholog_one2many 8 retrogenes
retro_pvam_117, retro_pvam_1355, retro_pvam_1358, retro_pvam_554, retro_pvam_638, retro_pvam_660, retro_pvam_77, retro_pvam_800,
Sarcophilus harrisii ENSSHAG00000011200 ortholog_one2many 10 retrogenes
retro_shar_135, retro_shar_228, retro_shar_418, retro_shar_436, retro_shar_441, retro_shar_443, retro_shar_450, retro_shar_504, retro_shar_544, retro_shar_785,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_16 99.15 100.00
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Download FASTA sequences of all ENSMMUG00000021314 retrocopies