RetrogeneDB ID: | retro_amel_495 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192475.1:265797..266102(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSAMEG00000006087 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 71.84 % |
Parental protein coverage: | 87.18 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCG |
AFK...KTP.EP.VA.H.IR.TLTS.....L.KVCADLIRGAKEKNLKVK..V.MPTKTLRIT.RK..CG | |
Retrocopy | AFKNA*KTPMEPQVASH*IRMTLTSHSIEPLRKVCADLIRGAKEKNLKVKESVQMPTKTLRITIRKAACG |
Parental | EGSKTWDRFQM-RIHKRLIDLHSPSEIVKQITS |
E.SKTWD.FQM..IHK..ID.H.PSEIVK.ITS | |
Retrocopy | ECSKTWDHFQM<GIHKQCIDWHCPSEIVKLITS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |