RetrogeneDB ID: | retro_sara_537 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_231822:1250..1606(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSSARG00000014249 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 84.17 % |
Parental protein coverage: | 78.15 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | FASFNDT-FVHVTDLSGKETICRVTGG-MKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATG |
FASFNDT.FVHVTDLSGK.TICRVT...MKVK.DRDES.PYAAMLAAQDVAQ.C..LGITAL.IKLR.TG | |
Retrocopy | FASFNDT<FVHVTDLSGKKTICRVTADEMKVKVDRDESFPYAAMLAAQDVAQWCQLLGITALRIKLRTTG |
Parental | GNRTKTPGPGAQSALRAMARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL |
GN.TK.PGPGAQSALRA.ARSGMKIGRIEDVTPI.SDST.RKGGRRG..L | |
Retrocopy | GNQTKIPGPGAQSALRAHARSGMKIGRIEDVTPIQSDSTCRKGGRRGHHL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |