Parental gene:

RPS14, ENSGGOG00000024593

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:134295543..134302185(-)


>ENSGGOG00000024593
TGGAGACAACGTGCAGAAATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGT
GGCTGAAGGAGAGAATGTATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCTTT
CTGGCAAAGAAACCATCTGCCGTGTGACTGGTGGGATGAAGGTGAAAGCAGATCGAGATGAATCCTCACCATATGCTGCT
ATGTTGGCTGCCCAGGATGTGGCCCAGAGGTGCAAGGAGCTAGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGG
AGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGC
GGATTGAGGATGTCACCCCCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 190 .33 RPM
SRP007412_cerebellum 150 .38 RPM
SRP007412_heart 137 .62 RPM
SRP007412_kidney 391 .59 RPM
SRP007412_liver 366 .68 RPM
SRP007412_testis 282 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015004 ortholog_one2one 1 retrogene
retro_acar_201,
Ailuropoda melanoleuca ENSAMEG00000004644 possible_ortholog 2 retrogenes
retro_amel_1390, retro_amel_524,
Bos taurus ENSBTAG00000008570 ortholog_one2many 2 retrogenes
retro_btau_1109, retro_btau_213,
Canis familiaris ENSCAFG00000018094 ortholog_one2many 2 retrogenes
retro_cfam_1589, retro_cfam_301,
Callithrix jacchus ENSCJAG00000020981 ortholog_one2many 1 retrogene
retro_cjac_89,
Cavia porcellus ENSCPOG00000024408 possible_ortholog 2 retrogenes
retro_cpor_253, retro_cpor_284,
Dipodomys ordii ENSDORG00000007146 ortholog_one2one 2 retrogenes
retro_dord_174, retro_dord_330,
Echinops telfairi ENSETEG00000002899 ortholog_one2one 6 retrogenes
retro_etel_1270, retro_etel_1358, retro_etel_1851, retro_etel_1995, retro_etel_293, retro_etel_967,
Homo sapiens ENSG00000164587 ortholog_one2one 8 retrogenes
retro_hsap_119, retro_hsap_1622, retro_hsap_268, retro_hsap_3001, retro_hsap_3113, retro_hsap_3232, retro_hsap_3495, retro_hsap_3789,
Latimeria chalumnae ENSLACG00000016164 ortholog_one2many 1 retrogene
retro_lcha_12,
Loxodonta africana ENSLAFG00000031195 ortholog_one2many 2 retrogenes
retro_lafr_235, retro_lafr_67,
Macropus eugenii ENSMEUG00000014907 ortholog_one2one 1 retrogene
retro_meug_619,
Microcebus murinus ENSMICG00000002900 ortholog_one2one 2 retrogenes
retro_mmur_1569, retro_mmur_433,
Myotis lucifugus ENSMLUG00000013279 ortholog_one2many 4 retrogenes
retro_mluc_1837, retro_mluc_205, retro_mluc_2464, retro_mluc_2485,
Macaca mulatta ENSMMUG00000002848 ortholog_one2many 5 retrogenes
retro_mmul_1921, retro_mmul_1983, retro_mmul_358, retro_mmul_570, retro_mmul_90,
Mustela putorius furo ENSMPUG00000013776 possible_ortholog 1 retrogene
retro_mputfur_127,
Nomascus leucogenys ENSNLEG00000010366 possible_ortholog 1 retrogene
retro_nleu_101,
Oryctolagus cuniculus ENSOCUG00000011509 possible_ortholog 1 retrogene
retro_ocun_128,
Otolemur garnettii ENSOGAG00000000721 ortholog_one2many 1 retrogene
retro_ogar_286,
Procavia capensis ENSPCAG00000015960 ortholog_one2one 3 retrogenes
retro_pcap_198, retro_pcap_443, retro_pcap_73,
Pongo abelii ENSPPYG00000015950 ortholog_one2one 7 retrogenes
retro_pabe_1340, retro_pabe_2487, retro_pabe_2571, retro_pabe_2888, retro_pabe_3204, retro_pabe_401, retro_pabe_494,
Pelodiscus sinensis ENSPSIG00000005922 ortholog_one2one 1 retrogene
retro_psin_33,
Pan troglodytes ENSPTRG00000017418 ortholog_one2one 8 retrogenes
retro_ptro_1086, retro_ptro_130, retro_ptro_2030, retro_ptro_2104, retro_ptro_2184, retro_ptro_224, retro_ptro_2367, retro_ptro_2570,
Rattus norvegicus ENSRNOG00000018774 possible_ortholog 10 retrogenes
retro_rnor_1313, retro_rnor_1467, retro_rnor_1532, retro_rnor_1759, retro_rnor_1875, retro_rnor_1918, retro_rnor_2181, retro_rnor_228, retro_rnor_2728, retro_rnor_873,
Sorex araneus ENSSARG00000014249 ortholog_one2one 1 retrogene
retro_sara_537,
Sarcophilus harrisii ENSSHAG00000018052 ortholog_one2one 3 retrogenes
retro_shar_380, retro_shar_381, retro_shar_503,
Tupaia belangeri ENSTBEG00000006368 ortholog_one2one 10 retrogenes
retro_tbel_1147, retro_tbel_1332, retro_tbel_1603, retro_tbel_1868, retro_tbel_202, retro_tbel_3517, retro_tbel_3619, retro_tbel_416, retro_tbel_519, retro_tbel_740,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_222 90.51 100.00
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2. retro_ggor_316 82.96 84.08
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3. retro_ggor_1225 81.19 63.06
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4. retro_ggor_2080 50.59 54.14
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5. retro_ggor_2135 75.00 100.00
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6. retro_ggor_2199 87.26 100.00
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7. retro_ggor_2362 70.49 77.71
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8. retro_ggor_2548 71.05 71.97
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Download FASTA sequences of all ENSGGOG00000024593 retrocopies