RetrogeneDB ID: | retro_shar_273 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841162.1:1812995..1813352(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COQ7 | ||
Ensembl ID: | ENSSHAG00000018111 | ||
Aliases: | None | ||
Description: | coenzyme Q7 homolog, ubiquinone (yeast) [Source:HGNC Symbol;Acc:2244] |
Percent Identity: | 61.34 % |
Parental protein coverage: | 54.59 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | FNELMVTFRVRPTILMPFWNVMGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDAEKYEE |
FN.L..TF...P.I.MPFWN..G..L.....LLGKEG.M.CTVA.EE.IAH.Y...IRTL..E..EKYE. | |
Retrocopy | FNKLTITFIG*PIIQMPFWNGVGLVLVV*IVLLGKEGTMTCTVAIEELIAHYYDK*IRTLLKEYLEKYEK |
Parental | LLQTIKKFRDEELEHHDTGLDHNAELAPAYSILKGAIQVGCKAAIYLSE |
.LQ.IK.F.DEELEHHDTGLD...E..PA..ILK..IQV.CKA.IYLS. | |
Retrocopy | FLQIIKPFQDEELEHHDTGLDYDVEMVPACIILKSKIQVQCKAEIYLSK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000406 | 4 retrocopies | |
Echinops telfairi | ENSETEG00000016203 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000006604 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000018111 | 1 retrocopy |
retro_shar_273 ,
|
Ictidomys tridecemlineatus | ENSSTOG00000003901 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000001643 | 1 retrocopy |