RetrogeneDB ID: | retro_tbel_3807 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_16282:74135..74523(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FKBP3 | ||
Ensembl ID: | ENSTBEG00000006017 | ||
Aliases: | None | ||
Description: | FK506 binding protein 3, 25kDa [Source:HGNC Symbol;Acc:3719] |
Percent Identity: | 65.67 % |
Parental protein coverage: | 66.17 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KFWQEHGSKSFLAEHKLLGNIKNVAKTANKDHLVTAYNHLFESKRF-KGTESISKVSEQVKNVKLNEDKP |
KF.Q.H.S..FL.EHK.LGNIKNVAKTAN...LVT.YNHLFESK...KG......VSEQVKNVKL.E..P | |
Retrocopy | KFLQKHCSDLFLVEHKFLGNIKNVAKTANTYSLVTDYNHLFESKAW>KGNKV--QVSEQVKNVKLYENIP |
Parental | KETKSEETQDEGPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKSA |
K.TK.EE...EG..KY.KS.LKKG.KTNFPKKGD.VHCWY.GTL...T..D.NI..SS.KK.S. | |
Retrocopy | K*TKTEE--GEGAQKYLKSFLKKGGKTNFPKKGDAVHCWYRGTLYN*TISDANI*KSSRKKVSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |