RetrogeneDB ID: | retro_tbel_730 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2875:237695..238234(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FKBP3 | ||
Ensembl ID: | ENSTBEG00000006017 | ||
Aliases: | None | ||
Description: | FK506 binding protein 3, 25kDa [Source:HGNC Symbol;Acc:3719] |
Percent Identity: | 89.5 % |
Parental protein coverage: | 89.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KFWQEHGSKSFLAEHKLLGNIKNVAKTANKDHLVTAYNHLFESKRFKGTESISKVSEQVKNVKLNEDKPK |
KF.QE.GS.SFLAEH.LLGNIKNVA.TANKDHLVTAY.H.FESK.FKGTESISKVSEQVKNVKLNE.K.. | |
Retrocopy | KFLQERGSDSFLAEHNLLGNIKNVAETANKDHLVTAYKHHFESKCFKGTESISKVSEQVKNVKLNEEKLE |
Parental | ETKSEETQDEGPPKYTKSILKKG-DKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKSAKPLSFK |
ET.SEETQDEGPPKYTKSILKKG.DKTNFP.KGDVVHCWYTGTLQ.GTV.DTNIQTSSKKKKSAKPLSFK | |
Retrocopy | ETRSEETQDEGPPKYTKSILKKG<DKTNFPQKGDVVHCWYTGTLQGGTVIDTNIQTSSKKKKSAKPLSFK |
Parental | VGIGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDA |
VG.GKVIRGWDEALLT.SKGEKARLEIEPEW.YGKKGQPDA | |
Retrocopy | VGVGKVIRGWDEALLTVSKGEKARLEIEPEWVYGKKGQPDA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |