RetrogeneDB ID: | retro_tbel_4351 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_7811:13442..13882(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ANP32B | ||
Ensembl ID: | ENSTBEG00000002189 | ||
Aliases: | None | ||
Description: | acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:HGNC Symbol;Acc:16677] |
Percent Identity: | 81.33 % |
Parental protein coverage: | 62.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | ELVLDNCKSSDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSE-NRVYGGLDMLAEKLPN |
ELVLDN.KS.DGKIEGLTA.FVNLEFLSLINVGLISVSNL.KLP.LKKLE.S...RVY.GLDMLAEKLPN | |
Retrocopy | ELVLDNYKSRDGKIEGLTAKFVNLEFLSLINVGLISVSNLTKLPTLKKLEHSK<DRVYEGLDMLAEKLPN |
Parental | LTHLNLSGNKLKDISTLEP-LKKLEFLKSLDLFNCEVTNLNDYRESVFR-LLPQLTYLDGYDREDREAPD |
.THLNLSGNKLKDISTLEP.LKKLEFL..L.LFNCEVT.LNDY.ES.FR.L..QLTYL...D.ED.EA.D | |
Retrocopy | HTHLNLSGNKLKDISTLEP<LKKLEFLNGLHLFNCEVTKLNDYPESIFR>LPLQLTYLGICDQEDQEAYD |
Parental | SDAEVDGVDE |
SDAEVDGV.E | |
Retrocopy | SDAEVDGVYE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |