RetrogeneDB ID: | retro_tsyr_2143 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_95226:5400..5591(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YPEL2 | ||
Ensembl ID: | ENSTSYG00000005518 | ||
Aliases: | None | ||
Description: | yippee-like 2 (Drosophila) [Source:HGNC Symbol;Acc:18326] |
Percent Identity: | 53.85 % |
Parental protein coverage: | 71.11 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MVKMTRSKTFQAYLPSCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNS-VVNVGCGPAEE |
M.KMT..KTF...LPSCH..Y...HC.AHLA....L.SK....SQ...YLFNS..VNV.C.P..E | |
Retrocopy | MIKMTN*KTFPGSLPSCH*FYCYSHCKAHLADYALLVSKFPCVSQNQDYLFNS<WVNVDCDPTKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Equus caballus | ENSECAG00000018575 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000029581 | 1 retrocopy | |
Sorex araneus | ENSSARG00000009791 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000001013 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000013138 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000005518 | 1 retrocopy |
retro_tsyr_2143 ,
|
Vicugna pacos | ENSVPAG00000000381 | 1 retrocopy |