RetrogeneDB ID: | retro_tsyr_48 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_1251:12615..12943(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HINT2 | ||
Ensembl ID: | ENSTSYG00000002700 | ||
Aliases: | None | ||
Description: | histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:18344] |
Percent Identity: | 54.55 % |
Parental protein coverage: | 77.3 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | IFSRILDRSLPADILYEDQQCLVFRDVAPQAPVHFLVIPKKPIPRISQAEEEDQQLLGHLLLVAKKIATA |
IF..I......A.I..ED..CL.F.D..PQAP.HFLV..KK.I..IS.A...D..LLGHL..V.KK.A.. | |
Retrocopy | IFGKIIHKEITAKIIFEDDRCLAFHDISPQAPTHFLVVRKKHIFQISAAADDDESLLGHLMIVGKKCADD |
Parental | EGLGDG-YRLVINDGKLGAQSVYHLHIHVLGGRQLRWPPG |
.GL..G.Y..V.N.G..G.QSVYH.H.HVLGGRQ..WPPG | |
Retrocopy | LGLNKG>Y*MVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |