RetrogeneDB ID: | retro_ttru_1721 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_88410:5468..5705(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRPS18C | ||
Ensembl ID: | ENSTTRG00000004897 | ||
Aliases: | None | ||
Description: | mitochondrial ribosomal protein S18C [Source:HGNC Symbol;Acc:16633] |
Percent Identity: | 75.31 % |
Parental protein coverage: | 55.24 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VTSNEDLPVPMENPYKEPLKKCILCGKRVDYKNVQLLSQFISPFTGCIYGR-HITGLCG-KKQKEITKAI |
.T.NEDLP.PMENPYKEP..KCILCG...D.KNVQL.SQFI.PF...IYGR..I.GLCG.KKQKEIT.AI | |
Retrocopy | ITRNEDLPIPMENPYKEPHRKCILCGTWLD*KNVQLFSQFIFPFIR*IYGR>NIIGLCG<KKQKEITEAI |
Parental | KRAQIMGFMPV |
KRAQIMGFM.V | |
Retrocopy | KRAQIMGFMSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |