RetrogeneDB ID: | retro_ttru_485 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_245:466706..467501(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRPS1 | ||
Ensembl ID: | ENSTTRG00000003835 | ||
Aliases: | None | ||
Description: | phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] |
Percent Identity: | 82.9 % |
Parental protein coverage: | 83.96 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | DVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYAR-QDKKDKSRAPISAKLVANMLSVAG |
DV.I.QSGCG.INDN.MEL.IMINACKIA.ASRVTAVIPCFP.AR.QDK.DKSRA.ISAKLV.N.LS.AG | |
Retrocopy | DVHILQSGCGKINDNRMELFIMINACKIAPASRVTAVIPCFPCAR<QDKEDKSRAAISAKLV-NTLSIAG |
Parental | ADHIITMDLHASQIQGFF-DIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDF |
.D.IITM....S...G.F.DIPVDNLYA.PAVLKWI.ENISEWRN.TIVSPDAGGAK.VT..A.RLNVDF | |
Retrocopy | TDRIITMGQRFSN-SGLF>DIPVDNLYADPAVLKWIKENISEWRNGTIVSPDAGGAKGVTAVAERLNVDF |
Parental | ALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAIS |
ALIHKE.KKANEVDR.VLVG.VKD.VAILVDDMAD.C.TIC.AADKL.SAGATRVYAILTHGIFSGPAI. | |
Retrocopy | ALIHKEPKKANEVDRKVLVGYVKDCVAILVDDMADPCDTICYAADKLFSAGATRVYAILTHGIFSGPAIT |
Parental | RINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL |
.IN.A.FEAVVVTNTIP.EDK.KHCSKIQVIDISMILAEAIRRTHNGESV.YLFSHVPL | |
Retrocopy | HINSAGFEAVVVTNTIP*EDKVKHCSKIQVIDISMILAEAIRRTHNGESVVYLFSHVPL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |