RetrogeneDB ID: | retro_ttru_974 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_866:35029..35764(-) | ||
Located in intron of: | ENSTTRG00000010620 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | STRAP | ||
Ensembl ID: | ENSTTRG00000003466 | ||
Aliases: | None | ||
Description: | serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796] |
Percent Identity: | 91.02 % |
Parental protein coverage: | 70. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VDFTQDSNCLLTGGQDKLLRIYDLNKPEADPKEISGHTSGIKKALWCSEDKQILSADDKTVRLWDHATMT |
.DFTQD.N.LLTGGQDKLL..YDLNKPEA.PKEISGHTSGIKKALWCSEDKQILSADDKTVRLWDHATMT | |
Retrocopy | LDFTQDTNYLLTGGQDKLLCVYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSADDKTVRLWDHATMT |
Parental | EVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPEKEFLVAGGEDF |
E..SLNFNMSV.SMEYIPEGEILVITYGRS.AFHSAVS.DPIKSFEAPATINSASLHPEKEFLVAGGEDF | |
Retrocopy | EMRSLNFNMSVCSMEYIPEGEILVITYGRSTAFHSAVSSDPIKSFEAPATINSASLHPEKEFLVAGGEDF |
Parental | KLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKCVLPEEDSGEL |
.L.KYD.NSGEELESYKGH.GPIHCVRFSPDG.L.ASGSEDGTLRLWQTVVGKTYGLWK.VLPEEDSGEL | |
Retrocopy | TLCKYDSNSGEELESYKGHLGPIHCVRFSPDGQLDASGSEDGTLRLWQTVVGKTYGLWKYVLPEEDSGEL |
Parental | AKPKISFPETAEEELEEIASENSDSIYSSTPEVKA |
A.P.ISFPETAEEELEEIASENSD.IYS.TPEVKA | |
Retrocopy | AEPRISFPETAEEELEEIASENSDAIYSATPEVKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000007422 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000021593 | 1 retrocopy | |
Homo sapiens | ENSG00000023734 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000009939 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000013307 | 2 retrocopies | |
Mus musculus | ENSMUSG00000030224 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000004160 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000015211 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000004334 | 3 retrocopies | |
Pan troglodytes | ENSPTRG00000004734 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000003466 | 2 retrocopies |
retro_ttru_581, retro_ttru_974 ,
|