Parental gene:

Bo7g111550

Aliases:None
Description:None
Organism:Brassica oleracea
Coordinates:C7:44365121..44368128(-)


>Bo7g111550
ATGAAGATTGTCCGCAGAGATTTCGTTCGTAATGGACCCGGAAGCGTTAAGATGGTGGCTGAGGACTCTGATGATCTCTG
GTATGCTTATAACCTCATTGCCGTCCGAGATAGTGTAATGGCTGTCACTTTTAGAAAGGTTCAGAGAGAGGTGCCTGGTG
GGGGAAGAGACTCTGAACGTGTTAGACTGAAGCTCGAAGTACAAGTTGAGGAGGTGGACTACGACAAAGACGCGGCTGTT
CTGCGCATACGTGGGAAGAATATCCTGGAGAATGATCACGTAAAGATTGGTGCATTCCATACTTTGGAGATTGAGCTGAA
ACGACCTTTTGTATTGAGAAAGGGAATATGGGACTCACTGGCTCTTGACACACTCAAGCAGGCTTCAGATCCCGCTGCTA
GTGCTGATCTAGCTGTAGTTCTAATGCAAGAGGGACTTGGACAAATCTTCCTTGTCGGCAGAAGTGTGACAAGTAGCCGT
GCACGAATAGAAACATCAATTCCTAGGAAGCATGGACCTGCCATTGCTGGTTACGAATCTGCTTTGAAGAAATTCTTTGA
GAATGTTCTGCAGGCCTTTGCGAAACATGTTGACTTCAGTGTCGTTCGTTGTGCAGTGATCGCTAGTCCCGGCTTTACAA
AGGATCAGTTTCATCGTCACTTGTTATTGGAAGCTGAAAGAAGACAGTTGAGACCTATAATTGAGAACAAATCACGTATA
ATTCTGGTGCACACGAACTCTGGTTATAGACATAGCCTAGGAGAGGTTCTTAATGCACCCAACGTGATGAATATGATCAA
AGATACTAAAGCAGCAAAAGAGGTCAAAGCTCTCAACGATTTCTTCACCATGCTTTCAAATGATCCAGCTCGAGCATGCT
ATGGACCAAAACATGTAGAAGTTGCTCACGAGCGAATGGCAGTCCAAACACTTCTCATCACCGATGAGCTTTTCAGGAAC
TCTGACGTGAAAACAAGGAAAAAGTATGTGGATTTGGTGGAGTCGGTGAAAGATTCAGGAGGAGAGGCTTTTATATTCTC
GTCGATGCATGTTTCAGGGGAACAGTTGGCACAACTCACTGGAATTGCAGCTCTTCTCAGGTTCCCTTTACCAGACCTCG
AAGACATTGAGATGTAA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT4G27650 ortholog_one2many 1 retrogene
retro_atha_7,
Brassica rapa Bra019037 ortholog_one2one 1 retrogene
retro_brap_29,
Aegilops tauschii F775_08238 ortholog_many2many 1 retrogene
retro_atau_9,
Hordeum vulgare MLOC_5075 ortholog_many2many 1 retrogene
retro_hvul_86,
Hordeum vulgare MLOC_54416 ortholog_many2many 1 retrogene
retro_hvul_87,
Theobroma cacao TCM_025327 ortholog_one2many 1 retrogene
retro_tcac_21,
Vitis vinifera VIT_04s0023g00140 ortholog_one2many 1 retrogene
retro_vvin_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_bole_15 77.02 84.92
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Download FASTA sequences of all Bo7g111550 retrocopies