Parental gene:

FAM122B, ENSBTAG00000001886

Aliases:None
Description:protein FAM122B [Source:RefSeq peptide;Acc:NP_001077263]
Organism:Cow (Bos taurus)
Coordinates:X:18407390..18436265(-)


>ENSBTAG00000001886
ATGGCTCAGGAGAAAATGGAGCTGGACTTTGAGCCTGACACATCTGATGGGGGCACCCTCAGGAGATCTAACAGCGCTCC
CTTGATCCATGGGCTCAGTAATTGGGTTGGGGCATTCAACCCATTTACATTTAAGTGTGTGAGAAACAGCAAATCAGAAG
AAACTAGACATCTTCCATTGCTGTCAACCTCACCTAATCGGATTCCTAGCAGCAGACTGCATCAAATCAAAAGGGAGGAA
GGCATGGACATAATGAACAGAGAAACTGCGCATGAAAGAGAAGTGCAAACTGCAATGCAGATAAGCCAATCATGGGATGA
GAGCTTGAGCCTGAGTGATAGTGATTTTGACAAGCAGGAGAAATTATATTCTCCTAAAAGGATTGACTTCACTCCTGTTT
CTCCTGCACCATCACCCACCAGAGGATTTGGAAAGCAATGTTTTTCACCATCCTTGCAGATGTTTGTGAGCAGCAGTGGG
TTACCACCAAGTCCCGTTCCTAGCCCAAGACGCTTTTCCACGAGAAGCCAGAGTCCAATCAAGTGCATTAGGCCCAGTGT
TCTTGCTCCTCTTAAAAGAAAAGGTGAAATGGAGACCGAAAGCCAGCCCAAGAGGCTCTTCCAAGGCACCACCAATATGC
TGTCTCCAGAGGCTGCACAATTGTCTGATCTCAGTTCATGGTGGTGTTTTCAAGGAGAAGAAATTCCTGCCTTGACCAGA
TGTGTGGAGCACCTACAAATGAATGAATAA

Library Parental gene expression (RPM)
ERP005899_liver 1 .30 RPM
ERP005899_muscle 4 .17 RPM
SRP017611_brain 8 .22 RPM
SRP017611_kidney 6 .34 RPM
SRP017611_liver 2 .04 RPM
SRP030211_testis 2 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001311 ortholog_one2one 1 retrogene
retro_amel_105,
Canis familiaris ENSCAFG00000018882 ortholog_one2one 1 retrogene
retro_cfam_181,
Callithrix jacchus ENSCJAG00000004313 ortholog_one2one 1 retrogene
retro_cjac_594,
Cavia porcellus ENSCPOG00000011218 ortholog_one2one 1 retrogene
retro_cpor_80,
Equus caballus ENSECAG00000018643 ortholog_one2one 1 retrogene
retro_ecab_91,
Felis catus ENSFCAG00000024842 ortholog_one2one 1 retrogene
retro_fcat_1575,
Myotis lucifugus ENSMLUG00000007988 ortholog_one2one 1 retrogene
retro_mluc_382,
Macaca mulatta ENSMMUG00000016948 ortholog_one2one 1 retrogene
retro_mmul_185,
Mustela putorius furo ENSMPUG00000012690 ortholog_one2one 1 retrogene
retro_mputfur_64,
Mus musculus ENSMUSG00000036022 ortholog_one2one 1 retrogene
retro_mmus_22,
Rattus norvegicus ENSRNOG00000050146 ortholog_one2many 1 retrogene
retro_rnor_651,
Sus scrofa ENSSSCG00000012685 ortholog_one2one 1 retrogene
retro_sscr_60,
Ictidomys tridecemlineatus ENSSTOG00000006261 ortholog_one2one 1 retrogene
retro_itri_61,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_103 72.25 83.13
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000001886 retrocopies