Parental gene:

FAM122B, ENSFCAG00000024842

Aliases:None
Description:family with sequence similarity 122B [Source:HGNC Symbol;Acc:30490]
Organism:Cat (Felis catus)
Coordinates:X:110034135..110056426(-)


>ENSFCAG00000024842
ATGGCTCAGGAGAAAATGGAGCTGGACTTTGAGCCTGACACATCTGATGGGGGCGCCCTGAGGAGATCCAGCAGCGCTCC
CCTGATCCACGGGCTCAGTGATCTTTCTCAGGTTTTTCAACCTTACACATTTAGAACTCGGAGGAATAGTACAACGATTA
TGAGCCGTCATACCCTGTTGCTGTCGTCATCACCAAATCGCGTTCCTAGTAGCAGACTGCATCAGATCAAAAGGGAGGAA
GGCATGGATATGATGAACAGAGAAACTGCACACGAACGGGAAGTGCAGACAGCAATGCAGATCAGCCAGTCATGGGACGA
GAGCTTGAGCCTGAGTGATAGCGATTTTGAGAAGCCGGAGAAACTATATTCTCCTAAAAGGATTGACTTCACTCCAGTTT
CTCCGGCACCATCACCCACCAGAGGGTTTGGAAAGCAATGTTTTTCACCATCCTTACAAATGTTTGTGAGCAGCAGTGGG
CTGCCGCCAAGTCCCGTGCATAGTCCAAGACGCTTTTCCAGCAGGAGGAGTCAGAGTCCAGTCAAGTGCATTAGGCCCAG
TGTTCTTGGTCCTCTTAAAAGAAAAGGTGAAATGGAAACAGAGAGCCAGCCCAAGAGGCTCTTCCAAGGCACTACCAATA
TGCTGTCTCCGGAGGCTGCACAACTGTCTGATCTCAGTTCATGTTCAGATATTTTGGATGGCAGTAGTAGCAGCAGTGGC
TTATCCTCAGACTCACTGGCTAAAGGCAGCACAACCGCAGAGTCTCCAGTAGCATGCACCAATTCATGCTCTTCGTTCAT
CTTGATGGATGATCTCTCACCCAAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 28 .81 RPM
SRP017611_kidney 24 .53 RPM
SRP017611_liver 9 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001311 ortholog_one2one 1 retrogene
retro_amel_105,
Bos taurus ENSBTAG00000001886 ortholog_one2one 1 retrogene
retro_btau_103,
Canis familiaris ENSCAFG00000018882 ortholog_one2one 1 retrogene
retro_cfam_181,
Callithrix jacchus ENSCJAG00000004313 ortholog_one2one 1 retrogene
retro_cjac_594,
Cavia porcellus ENSCPOG00000011218 ortholog_one2one 1 retrogene
retro_cpor_80,
Equus caballus ENSECAG00000018643 ortholog_one2one 1 retrogene
retro_ecab_91,
Myotis lucifugus ENSMLUG00000007988 ortholog_one2one 1 retrogene
retro_mluc_382,
Macaca mulatta ENSMMUG00000016948 ortholog_one2one 1 retrogene
retro_mmul_185,
Mustela putorius furo ENSMPUG00000012690 ortholog_one2one 1 retrogene
retro_mputfur_64,
Mus musculus ENSMUSG00000036022 ortholog_one2one 1 retrogene
retro_mmus_22,
Rattus norvegicus ENSRNOG00000050146 ortholog_one2many 1 retrogene
retro_rnor_651,
Sus scrofa ENSSSCG00000012685 ortholog_one2one 1 retrogene
retro_sscr_60,
Ictidomys tridecemlineatus ENSSTOG00000006261 ortholog_one2one 1 retrogene
retro_itri_61,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1575 69.81 95.27
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Download FASTA sequences of all ENSFCAG00000024842 retrocopies