Parental gene:

CWC15, ENSBTAG00000007913

Aliases:None
Description:Protein CWC15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q2KJD3]
Organism:Cow (Bos taurus)
Coordinates:15:15705459..15713952(+)


>ENSBTAG00000007913
ATGACAACAGCAGCTCGGCCAACTTTTGAACCTGCAAGAGGTGGAAGAGGAAAAGGTGAGGGTGATTTGAGCCAGCTCTC
AAAGCAGTATTCAAGCAGAGACCTACCCTCTCATACAAAGATAAAATATAGACAGACCACTCAGGATGCCCCTGAAGAGG
TTCGAAACCGTGACTTCAGGAGAGAGTTGGAGGAGAGAGAGAGAGCTGCTGCAAGAGAAAAAAACAGAGATCGGCCAACC
CGAGAACATACAACCTCCTCTTCAGTGTCAAAGAAGCCTCGACTGGACCAGATTCCTGCTGCCAACCTTGATGCAGATGA
TCCACTAACAGATGAGGAAGATGAAGATGAAGATTTTGAAGAGGAGAGTGATGATGACGATACTGCAGCTCTTCTTGCCG
AGCTGGAAAAAATTAAAAAAGAAAGAGCTGAAGAGCAGGCCAGGAAGGAACAAGAACAAAAGGCTGAAGAAGAAAGGATT
CGTATGGAAAACATTCTGAGTGGAAACCCTCTTCTTAATCTCACTGGCCCATCCCAGCCTCAGGCCAACTTCAAAGTTAA
AAGAAGGTGGGATGATGACGTTGTTTTCAAGAACTGTGCAAAAGGTGTAGATGATCAGAAGAAAGACAAAAGATTTGTAA
ATGATACGCTTCGATCTGAATTTCACAAAAAGTTCATGGAGAAATACATTAAATAG

Library Parental gene expression (RPM)
ERP005899_liver 53 .86 RPM
ERP005899_muscle 47 .14 RPM
SRP017611_brain 67 .51 RPM
SRP017611_kidney 52 .57 RPM
SRP017611_liver 29 .15 RPM
SRP030211_testis 72 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011392 ortholog_one2one 1 retrogene
retro_amel_1913,
Canis familiaris ENSCAFG00000004134 ortholog_one2many 6 retrogenes
retro_cfam_1329, retro_cfam_2123, retro_cfam_503, retro_cfam_537, retro_cfam_61, retro_cfam_805,
Callithrix jacchus ENSCJAG00000004188 possible_ortholog 1 retrogene
retro_cjac_2802,
Cavia porcellus ENSCPOG00000006249 possible_ortholog 1 retrogene
retro_cpor_708,
Dipodomys ordii ENSDORG00000011075 ortholog_one2one 1 retrogene
retro_dord_313,
Echinops telfairi ENSETEG00000006649 possible_ortholog 1 retrogene
retro_etel_647,
Felis catus ENSFCAG00000007826 ortholog_one2many 1 retrogene
retro_fcat_1416,
Myotis lucifugus ENSMLUG00000002032 ortholog_one2many 3 retrogenes
retro_mluc_102, retro_mluc_2143, retro_mluc_2478,
Mus musculus ENSMUSG00000004096 possible_ortholog 2 retrogenes
retro_mmus_2482, retro_mmus_593,
Ornithorhynchus anatinus ENSOANG00000010404 ortholog_many2many 1 retrogene
retro_oana_5,
Oryctolagus cuniculus ENSOCUG00000001629 ortholog_one2one 4 retrogenes
retro_ocun_1037, retro_ocun_1605, retro_ocun_679, retro_ocun_743,
Otolemur garnettii ENSOGAG00000001686 possible_ortholog 2 retrogenes
retro_ogar_2476, retro_ogar_456,
Rattus norvegicus ENSRNOG00000008490 possible_ortholog 3 retrogenes
retro_rnor_2452, retro_rnor_251, retro_rnor_476,
Sarcophilus harrisii ENSSHAG00000016534 ortholog_many2many 5 retrogenes
retro_shar_26, retro_shar_333, retro_shar_447, retro_shar_596, retro_shar_768,
Tarsius syrichta ENSTSYG00000000407 possible_ortholog 1 retrogene
retro_tsyr_1585,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_703 78.40 69.70
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Download FASTA sequences of all ENSBTAG00000007913 retrocopies