Parental gene: | ENSSHAG00000016534 |
| Aliases: | None |
| Description: | None |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL849679.1:2212416..2241812(+) |
>ENSSHAG00000016534
ATGACAACAGCCGCAAGGCCTACATTTGAACCTGCAAGAGGTGGAAGAGGAAAAGGGGAAGGTGATTTGAGTCAGCTTTC
AAAACAATATTCAAGCAGAGATCTACCTTCTCACACAAAGATAAAATACAGACAAACCACTCAGGATGCTCCAGAAGAGG
TTCGCAACCGTGATTTCAGGAGAGAACTAGAAGAGAGAGAGAGAGTTGCTGCAAGAGAAAAAAACAGAGATCGTCCAACC
AGAGAGCATACAACTTCATCTTCTGTATCTAAGAAACCTCGGTTAGATCAGATTCCTGCAGCCAACCTTGATGCAGATGA
TCCCCTAACAGATGAAGATGATGAAGATGAGGATTTTGAGGAAGAAAGTGATGATGATGACACTGCAGCTCTACTAGCAG
AACTAGAAAAAATAAAAAAAGAAAGAGCTGAAGAACAAGCTCGGAAGGAACAAGAACAAAAGGCTGAAGAAGAGAGAATT
CGGATGGAAAATATCCTTAGTGGAAACCCTCTCCTAAATCTTACTGGTCCCTCTCAGCCTCAGGCCAACTTCAAAGTGAA
GAGAAGGTGGGATGATGATGTTGTCTTTAAGAACTGCGCCAAAGGAGTAGATGAGCTGAAAAAAGACAAAAGATTTGTAA
ATGATACCCTTCGATCAGAGTTTCACAAAAAGTTCATGGAGAAATATATCAAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011392 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000007913 | ortholog_many2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004134 | ortholog_many2many | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004188 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006249 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011075 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006649 | ortholog_many2many | 1 retrogene | |
| Felis catus | ENSFCAG00000007826 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002032 | ortholog_many2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000004096 | ortholog_one2many | 2 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000010404 | ortholog_many2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001629 | ortholog_one2many | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001686 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008490 | ortholog_many2many | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000407 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_26 | 91.34 | 100.00 | Please wait, loading  |
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| 2. | retro_shar_333 | 91.16 | 63.20 | Please wait, loading |
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| 3. | retro_shar_447 | 81.75 | 58.44 | Please wait, loading |
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| 4. | retro_shar_596 | 71.43 | 95.67 | Please wait, loading |
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| 5. | retro_shar_768 | 56.34 | 60.61 | Please wait, loading |
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Download FASTA sequences of all ENSSHAG00000016534 retrocopies