Parental gene:

ENSFCAG00000007826

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:D1:41308305..41317202(+)


>ENSFCAG00000007826
ATGACAACAGCAGCTAGGCCAACTTTTGAACCTGCCAGAGGGGGGAGAGGAAAAGGAGAAGGTGATTTGAGCCAACTCTC
AAAGCAGTATTCAAGTAGAGACCTACCTTCTCATACAAAGATAAAATATAGACAAACCACTCAGGATGCCCCTGAAGAGG
TTCGCAACCGTGACTTCAGGAGAGAGCTGGAGGAGAGAGAGCGAGCTGCCGCCAGAGAAAAAAATAGAGATCGTCCAACA
CGAGAACATACAACCTCCTCATCAGTGTCAAAGAAACCTCGGTTAGACCAGATTCCTGCTGCCAACCTTGATGCAGATGA
TCCTCTAACAGATGAGGAAGATGAAGATGAAGATTTTGAAGAGGAGAGTGATGATGATGATACTGCAGCTCTTCTTGCAG
AGCTAGAAAAAATTAAAAAAGAAAGAGCTGAAGAGCAGGCCAGGAAGGAACAAGAACAAAAAGCTGAAGAAGAAAGAATA
CGTATGGAAAACATATTGAGTGGAAACCCTCTCCTTAATCTCACTGGCCCATCCCAGCCTCAGGCCAACTTCAAAGTTAA
AAGAAGGTGGGATGATGATGTTGTTTTCAAGAACTGTGCAAAAGGTGTAGATGATCAGAAGAAAGACAAAAGATTTGTAA
ATGATACACTGCGATCTGAATTTCACAAAAAGTTCATGGAGAAATATATTAAATAG

Library Parental gene expression (RPM)
SRP017611_brain 13 .20 RPM
SRP017611_kidney 20 .20 RPM
SRP017611_liver 10 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011392 ortholog_one2one 1 retrogene
retro_amel_1913,
Bos taurus ENSBTAG00000007913 ortholog_one2many 1 retrogene
retro_btau_703,
Canis familiaris ENSCAFG00000004134 possible_ortholog 6 retrogenes
retro_cfam_1329, retro_cfam_2123, retro_cfam_503, retro_cfam_537, retro_cfam_61, retro_cfam_805,
Callithrix jacchus ENSCJAG00000004188 possible_ortholog 1 retrogene
retro_cjac_2802,
Cavia porcellus ENSCPOG00000006249 possible_ortholog 1 retrogene
retro_cpor_708,
Dipodomys ordii ENSDORG00000011075 ortholog_one2many 1 retrogene
retro_dord_313,
Echinops telfairi ENSETEG00000006649 possible_ortholog 1 retrogene
retro_etel_647,
Myotis lucifugus ENSMLUG00000002032 ortholog_many2many 3 retrogenes
retro_mluc_102, retro_mluc_2143, retro_mluc_2478,
Mus musculus ENSMUSG00000004096 possible_ortholog 2 retrogenes
retro_mmus_2482, retro_mmus_593,
Ornithorhynchus anatinus ENSOANG00000010404 ortholog_many2many 1 retrogene
retro_oana_5,
Oryctolagus cuniculus ENSOCUG00000001629 ortholog_one2many 4 retrogenes
retro_ocun_1037, retro_ocun_1605, retro_ocun_679, retro_ocun_743,
Otolemur garnettii ENSOGAG00000001686 possible_ortholog 2 retrogenes
retro_ogar_2476, retro_ogar_456,
Rattus norvegicus ENSRNOG00000008490 possible_ortholog 3 retrogenes
retro_rnor_2452, retro_rnor_251, retro_rnor_476,
Sarcophilus harrisii ENSSHAG00000016534 ortholog_many2many 5 retrogenes
retro_shar_26, retro_shar_333, retro_shar_447, retro_shar_596, retro_shar_768,
Tarsius syrichta ENSTSYG00000000407 possible_ortholog 1 retrogene
retro_tsyr_1585,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1416 87.07 100.00
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Download FASTA sequences of all ENSFCAG00000007826 retrocopies