Parental gene:

ENSOANG00000010404

Aliases:None
Description:None
Organism:Platypus (Ornithorhynchus anatinus)
Coordinates:Ultra29:3150923..3161495(-)


>ENSOANG00000010404
ATGACCACAGCGGCCAGACCTACTTTTGAGCCCGCGCGCGGAGGAAGAGGTAAAGGAGAAGGGGATCTGAGTCAGCTCTC
CAAGCAGTACTCAAGCAGAGATCTTCCTTCGCACACGAAGATCAAGTACAGGCAGACCACTCAGGATGCCCCCGAAGAGG
TGCGAAACCGCGACTTCAGAAGGGAACTGGAAGAGCGAGAGCGAGTTGCCGCAAGAGAGAAAACTAGGGATCGGCCAACC
CGAGAGCACACCACCTCATCAGTATCCAAGAAGCCTCGGTTAGACCAAATTCCCGCAGCAAACCTGGATGCAGATGATCC
CCTGACAGATGAGGACGACGAAGACGAGGACCTGGACGAGGAGAGCGACGATGACGACACGGCGGCCCTTCTGGCAGAGC
TGGAGAAGATCAAGAAGGAGCGAGCCGAAGAGCAGGCCCGGAAGGAGCAAGAGCAAAAAGCCGAAGAGGAGAGGATAAGG
ATGGAGAATATTCTCAGCGGAAATCCTCTCCTGAATCTCACCGGCCCAGCTCAACCTCAGGCGAATTTTAAAGTGAAGAG
AAGATGGGATGATGATGTCGTTTTTAAGAACTGCGCCAAAGGGGTCGATGAGTTGAAAAAGGACAAAAGATTTGTCAATG
ACACCCTGAGATCCGAATTTCACAAAAAGTTCATGGAGAAGTATATCAAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 23 .58 RPM
SRP007412_cerebellum 23 .97 RPM
SRP007412_heart 21 .70 RPM
SRP007412_kidney 14 .21 RPM
SRP007412_liver 7 .68 RPM
SRP007412_testis 19 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011392 ortholog_one2many 1 retrogene
retro_amel_1913,
Bos taurus ENSBTAG00000007913 ortholog_many2many 1 retrogene
retro_btau_703,
Canis familiaris ENSCAFG00000004134 ortholog_many2many 6 retrogenes
retro_cfam_1329, retro_cfam_2123, retro_cfam_503, retro_cfam_537, retro_cfam_61, retro_cfam_805,
Callithrix jacchus ENSCJAG00000004188 ortholog_one2many 1 retrogene
retro_cjac_2802,
Cavia porcellus ENSCPOG00000006249 ortholog_one2many 1 retrogene
retro_cpor_708,
Dipodomys ordii ENSDORG00000011075 ortholog_one2many 1 retrogene
retro_dord_313,
Echinops telfairi ENSETEG00000006649 ortholog_many2many 1 retrogene
retro_etel_647,
Felis catus ENSFCAG00000007826 ortholog_many2many 1 retrogene
retro_fcat_1416,
Myotis lucifugus ENSMLUG00000002032 ortholog_many2many 3 retrogenes
retro_mluc_102, retro_mluc_2143, retro_mluc_2478,
Mus musculus ENSMUSG00000004096 ortholog_one2many 2 retrogenes
retro_mmus_2482, retro_mmus_593,
Oryctolagus cuniculus ENSOCUG00000001629 ortholog_one2many 4 retrogenes
retro_ocun_1037, retro_ocun_1605, retro_ocun_679, retro_ocun_743,
Otolemur garnettii ENSOGAG00000001686 ortholog_one2many 2 retrogenes
retro_ogar_2476, retro_ogar_456,
Rattus norvegicus ENSRNOG00000008490 ortholog_many2many 3 retrogenes
retro_rnor_2452, retro_rnor_251, retro_rnor_476,
Sarcophilus harrisii ENSSHAG00000016534 ortholog_many2many 5 retrogenes
retro_shar_26, retro_shar_333, retro_shar_447, retro_shar_596, retro_shar_768,
Tarsius syrichta ENSTSYG00000000407 ortholog_many2many 1 retrogene
retro_tsyr_1585,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oana_5 78.70 100.00
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Download FASTA sequences of all ENSOANG00000010404 retrocopies