Parental gene:

SFRS9, ENSBTAG00000012792

Aliases:SRSF9, SFRS9
Description:serine/arginine-rich splicing factor 9 [Source:RefSeq peptide;Acc:NP_001076867]
Organism:Cow (Bos taurus)
Coordinates:17:65008121..65014401(-)


>ENSBTAG00000012792
ATGTCGGGCTGGGCGGACGAGCGCGGCGGCGAGGGCGACGGGCGCATCTACGTGGGGAACCTTCCGAGCGACGTGCGCGA
GAAGGATCTGGAGGACCTGTTCTACAAGTACGGCCGCATCAGCGAGATCGAGCTCAAGAATCGGCACGGCCTCGTGCCCT
TCGCCTTCGTGCGCTTCGAGGACCCCCGAGATGCTGAGGATGCAATTTATGGAAGGAACGGTTATGATTATGGCCAGTGT
CGGCTTCGTGTGGAGTTCCCCAGGACTTACGGAGGTCGGGGTGGGTGGCCCCGCGGTGGGAGGAGTGGGCCTCCTACAAG
AAGATCTGATTTCCGAGTTCTTGTTTCAGGACTTCCTCCATCAGGCAGCTGGCAGGACCTGAAGGATCACATGCGAGAAG
CTGGGGACGTCTGTTACGCAGATGTGCAGAAAGATGGAATGGGGATGGTTGAGTATCTCAGAAAAGAAGACATGGAATAT
GCCCTGCGTAAACTGGATGAAACCAAATTCCGCTCTCATGAGGGTGAAACATCCTACATCCGAGTTTATCCAGAGAGAAG
CACCAGCTATGGCTATTCACGGTCTCGGTCTGGGTCGAGGGGCCGTGACTCTCCATACCAAAGCAGGGGTTCCCCACACT
ACTTCTCTCCTTTCAGACCCTACTGA

Library Parental gene expression (RPM)
ERP005899_liver 14 .20 RPM
ERP005899_muscle 26 .50 RPM
SRP017611_brain 12 .97 RPM
SRP017611_kidney 21 .81 RPM
SRP017611_liver 11 .78 RPM
SRP030211_testis 21 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000040006 other_paralog 5 retrogenes
retro_btau_1176, retro_btau_1442, retro_btau_1445, retro_btau_1665, retro_btau_1813,
Choloepus hoffmanni ENSCHOG00000009241 ortholog_one2one 1 retrogene
retro_chof_1119,
Callithrix jacchus ENSCJAG00000001187 ortholog_one2one 1 retrogene
retro_cjac_442,
Dasypus novemcinctus ENSDNOG00000012598 ortholog_one2one 2 retrogenes
retro_dnov_1555, retro_dnov_2648,
Homo sapiens ENSG00000111786 ortholog_one2one 1 retrogene
retro_hsap_2530,
Macaca mulatta ENSMMUG00000016494 ortholog_one2one 1 retrogene
retro_mmul_2154,
Nomascus leucogenys ENSNLEG00000015661 ortholog_one2one 1 retrogene
retro_nleu_1931,
Otolemur garnettii ENSOGAG00000003852 ortholog_one2one 1 retrogene
retro_ogar_2328,
Ochotona princeps ENSOPRG00000004234 ortholog_one2one 1 retrogene
retro_opri_878,
Pongo abelii ENSPPYG00000005031 ortholog_one2many 1 retrogene
retro_pabe_119,
Sarcophilus harrisii ENSSHAG00000005685 ortholog_one2one 1 retrogene
retro_shar_598,
Sus scrofa ENSSSCG00000009906 ortholog_one2one 1 retrogene
retro_sscr_745,
Tupaia belangeri ENSTBEG00000008499 ortholog_one2one 1 retrogene
retro_tbel_2602,
Tarsius syrichta ENSTSYG00000006848 ortholog_one2one 4 retrogenes
retro_tsyr_1432, retro_tsyr_1648, retro_tsyr_585, retro_tsyr_891,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_837 97.74 100.00
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Download FASTA sequences of all ENSBTAG00000012792 retrocopies