Parental gene:

RHOC, ENSBTAG00000014299

Aliases:None
Description:Rho-related GTP-binding protein RhoC [Source:UniProtKB/Swiss-Prot;Acc:Q1RMJ6]
Organism:Cow (Bos taurus)
Coordinates:3:30769965..30776469(+)


>ENSBTAG00000014299
ATGGCTGCCATCCGGAAGAAGCTGGTGATTGTGGGGGATGGGGCCTGTGGGAAGACCTGCCTCCTTATCGTCTTCAGCAA
GGATCAGTTCCCAGAGGTCTACGTCCCTACGGTCTTTGAGAACTACATCGCAGACATAGAGGTGGATGGCAAGCAGGTGG
AGCTGGCTCTGTGGGACACGGCAGGGCAGGAAGACTACGACCGCCTGCGGCCTCTCTCCTACCCGGACACTGACGTCATT
CTCATGTGCTTCTCCATCGACAGCCCCGACAGTCTGGAAAACATTCCTGAGAAGTGGACCCCAGAAGTGAAGCACTTCTG
CCCCAACGTGCCCATCATCCTGGTGGGGAATAAGAAGGACCTGAGGCAAGATGAGCATACTCGGAGAGAGCTGGCCAAGA
TGAAGCAGGAACCTGTTCGATCTGAGGAAGGCCGGGACATGGCGAACCGAATCAGTGCCTTTGGCTACCTTGAGTGCTCA
GCCAAGACCAAGGAGGGGGTGCGGGAGGTATTTGAGATGGCCACCAGGGCTGGCCTCCAGGTCCGCAAGAATAAGCGCCG
GAGGGGCTGCCCCATTCTCTGA

Library Parental gene expression (RPM)
ERP005899_liver 4 .90 RPM
ERP005899_muscle 23 .12 RPM
SRP017611_brain 38 .92 RPM
SRP017611_kidney 33 .01 RPM
SRP017611_liver 8 .38 RPM
SRP030211_testis 29 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004279 within_species_paralog 2 retrogenes
retro_btau_206, retro_btau_540,
Canis familiaris ENSCAFG00000013413 ortholog_one2one 1 retrogene
retro_cfam_1152,
Callithrix jacchus ENSCJAG00000013657 ortholog_one2one 2 retrogenes
retro_cjac_1657, retro_cjac_2027,
Equus caballus ENSECAG00000010174 ortholog_one2one 3 retrogenes
retro_ecab_112, retro_ecab_257, retro_ecab_932,
Ficedula albicollis ENSFALG00000000736 ortholog_one2one 1 retrogene
retro_falb_11,
Gorilla gorilla ENSGGOG00000002741 ortholog_one2one 2 retrogenes
retro_ggor_18, retro_ggor_732,
Macropus eugenii ENSMEUG00000004807 possible_ortholog 1 retrogene
retro_meug_37,
Monodelphis domestica ENSMODG00000000981 ortholog_one2one 1 retrogene
retro_mdom_1245,
Otolemur garnettii ENSOGAG00000027678 ortholog_one2one 3 retrogenes
retro_ogar_2606, retro_ogar_3360, retro_ogar_58,
Sarcophilus harrisii ENSSHAG00000001981 ortholog_one2one 1 retrogene
retro_shar_455,
Taeniopygia guttata ENSTGUG00000017533 ortholog_one2one 1 retrogene
retro_tgut_11,
Tetraodon nigroviridis ENSTNIG00000015041 ortholog_one2many 1 retrogene
retro_tnig_2,
Xenopus tropicalis ENSXETG00000006898 ortholog_one2one 1 retrogene
retro_xtro_15,
Xiphophorus maculatus ENSXMAG00000008103 ortholog_one2one 1 retrogene
retro_xmac_13,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1171 52.00 50.78
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Download FASTA sequences of all ENSBTAG00000014299 retrocopies